Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 RNU6-1040P-201ENST00000383974 107 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 SNORA70.9-201ENST00000384370 135 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 RPL7P60-201ENST00000397636 735 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 SSXP10-201ENST00000402595 565 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC093151.1-201ENST00000427711 313 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 COX4I1P2-201ENST00000447446 547 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 RNU7-27P-201ENST00000459281 62 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 RN7SL39P-201ENST00000462264 297 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC126389.1-201ENST00000477436 290 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 RNU6-789P-201ENST00000517105 102 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC105031.1-201ENST00000518550 476 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC069061.3-201ENST00000582254 823 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC012368.3-201ENST00000604190 219 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 U2.1-201ENST00000618978 145 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 AL161912.4-201ENST00000623889 2468 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 API5P2-201ENST00000397055 1498 ntBASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.45□□□□□ -1.38
LYSMD3Q7Z3D4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 MTND5P28-201ENST00000438005 1594 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 ZNF402P-201ENST00000404435 3100 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC005225.5-201ENST00000623547 2225 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC004972.1-201ENST00000623934 2209 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RNU6-343P-201ENST00000364709 104 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RNU6-99P-201ENST00000364721 107 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 Y_RNA.455-201ENST00000384230 98 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RNU6-310P-201ENST00000384655 107 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AL590290.1-201ENST00000405336 380 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RNA5SP345-201ENST00000410646 108 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AL161722.1-201ENST00000446972 1032 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 MGAT2P1-201ENST00000449718 797 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RPL5P30-201ENST00000465511 891 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AL161747.1-201ENST00000480068 358 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RNA5SP418-201ENST00000515951 117 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RNU6-1143P-201ENST00000516125 104 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 SNORD27.1-201ENST00000516319 72 ntBASIC6.44□□□□□ -1.38
LYSMD3Q7Z3D4 RNA5SP473-201ENST00000516402 125 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms