Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL136133.1-201ENST00000413694 376 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 GJA6P-201ENST00000415117 1042 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 FCF1P2-201ENST00000415284 583 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 LINC00993-201ENST00000420453 540 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC009237.2-201ENST00000421358 284 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC234781.2-201ENST00000426370 994 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC005033.1-201ENST00000428904 813 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC005345.1-201ENST00000431868 217 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 MTND4P32-201ENST00000437189 1237 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 MTCYBP3-201ENST00000445588 1137 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 RPL23AP15-201ENST00000450202 459 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 RPS15AP1-201ENST00000457423 391 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 RPL23AP56-201ENST00000460778 453 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC010307.1-201ENST00000467206 836 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC140172.1-201ENST00000502928 141 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC004980.4-201ENST00000513375 203 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AF186190.1-201ENST00000517470 480 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 RPL21P7-201ENST00000557463 483 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC022069.1-201ENST00000582910 658 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 VN1R90P-201ENST00000595717 726 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 MEMO1P5-201ENST00000604810 406 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AL592221.1-201ENST00000605266 382 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AL354760.1-201ENST00000608357 643 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC072039.2-201ENST00000608883 439 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC015813.4-201ENST00000610469 179 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC243756.2-201ENST00000618406 463 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC140113.4-201ENST00000622087 222 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC055839.1-201ENST00000634467 498 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 MKKS-204ENST00000639674 192 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC053481.2-202ENST00000582394 1500 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 IRF5P1-201ENST00000504852 2164 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 DBF4P1-201ENST00000412976 1892 ntBASIC4.24□□□□□ -1.73
SHFQ7M4L6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SHFQ7M4L6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHFQ7M4L6 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SHFQ7M4L6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHFQ7M4L6 AL133243.3-201ENST00000617415 3004 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHFQ7M4L6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 RNU6-931P-201ENST00000363850 107 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 Y_RNA.311-201ENST00000365068 96 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHFQ7M4L6 PRRC2CP1-201ENST00000404428 159 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 HDGFP1-201ENST00000405943 252 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 SNORA11.5-201ENST00000408163 128 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 VDAC1P9-201ENST00000412766 841 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 AC114755.2-201ENST00000413520 361 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 P2RY10P2-201ENST00000416730 913 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 AC004448.2-201ENST00000422360 586 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 RPL37P1-201ENST00000432310 284 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 AC069285.2-201ENST00000440210 275 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SHFQ7M4L6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 MTND1P16-201ENST00000465177 898 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 RPL5P30-201ENST00000465511 891 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 CCDC75P1-201ENST00000469247 791 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 RN7SL817P-201ENST00000480777 288 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 LINC00888-204ENST00000487386 421 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 AC025674.1-201ENST00000507074 324 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 HSPE1P23-201ENST00000509838 286 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.23□□□□□ -1.73
SHFQ7M4L6 MTCO3P28-201ENST00000513351 515 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 RN7SKP66-201ENST00000516681 231 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 RNU6-759P-201ENST00000516740 103 ntBASIC4.23□□□□□ -1.73
SHFQ7M4L6 AP001189.2-201ENST00000527320 189 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms