Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RSPO4Q2I0M5 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RSPO4Q2I0M5 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RSPO4Q2I0M5 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC016251.2-201ENST00000623393 3089 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 CDC27P3-201ENST00000635418 1910 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AL512646.1-201ENST00000269395 1077 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 RNU6-216P-201ENST00000363282 104 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 RNU6-1188P-201ENST00000363795 107 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 SNORD113-1-201ENST00000365321 69 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 Y_RNA.396-201ENST00000383949 103 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 MIR16-1-201ENST00000385271 89 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 RPL31P52-201ENST00000407532 367 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 MIR1305-201ENST00000408300 86 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 MIR548F5-201ENST00000408421 86 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 SETP5-201ENST00000437270 562 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC092809.1-201ENST00000441469 474 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC107399.1-201ENST00000451226 265 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC083904.1-201ENST00000487828 231 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 RN7SL547P-201ENST00000490793 290 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 Y_RNA.682-201ENST00000516457 100 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 HMGB1P6-201ENST00000569046 646 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 MIR4436B2-201ENST00000581415 91 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 MIR4436B1-201ENST00000583272 91 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 BNIP3P16-201ENST00000589779 534 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 RNU6-87P-201ENST00000607561 108 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC008115.3-201ENST00000614874 549 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AL354950.2-201ENST00000617939 290 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AL354718.1-201ENST00000619764 589 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 DBF4P1-201ENST00000412976 1892 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 CLCA3P-203ENST00000490028 2781 ntBASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO4Q2I0M5 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 FAM32BP-201ENST00000344033 333 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 RNU6-1115P-201ENST00000362490 106 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 RNA5SP333-201ENST00000363466 118 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 Y_RNA.180-201ENST00000363867 113 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 RNA5SP334-201ENST00000364825 118 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 RNU6-187P-201ENST00000384139 106 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 Y_RNA.512-201ENST00000384518 102 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 MRPL42P2-201ENST00000403169 426 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 MIR548K-201ENST00000408406 116 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 RNU2-9P-201ENST00000410194 145 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 DUTP4-201ENST00000424782 475 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 PIGPP3-201ENST00000425307 415 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 RBMY2QP-201ENST00000429799 1147 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 AL136380.1-201ENST00000447970 162 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 RPL26P28-201ENST00000451325 435 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 AC091153.1-201ENST00000466297 402 ntBASIC5.93□□□□□ -1.46
RSPO4Q2I0M5 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms