Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ELOCP8-201ENST00000439309 332 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 ELOCP15-201ENST00000442090 332 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC112498.1-201ENST00000444401 332 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 SLC25A18P1-201ENST00000449385 454 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.05□□□□□ -1.76
SCN1BQ07699 SCARNA10-201ENST00000459255 330 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN1BQ07699 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN1BQ07699 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN1BQ07699 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.05□□□□□ -1.76
SCN1BQ07699 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC133555.2-201ENST00000550213 292 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.05□□□□□ -1.76
SCN1BQ07699 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC107954.1-201ENST00000565906 727 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN1BQ07699 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.05□□□□□ -1.76
SCN1BQ07699 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC113368.1-201ENST00000603736 382 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AC112230.1-201ENST00000604342 547 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AL513477.2-201ENST00000607858 568 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AP001521.2-201ENST00000608772 546 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AL592148.2-201ENST00000612210 372 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 MIR6862-1-201ENST00000613016 70 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AL354976.1-201ENST00000613843 387 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 MIR6862-2-201ENST00000614755 70 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 AL713922.2-201ENST00000619384 716 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AC091905.2-201ENST00000623143 306 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AC109454.4-201ENST00000623411 649 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AP002799.1-201ENST00000623552 423 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AL049536.1-201ENST00000625043 744 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AC004808.1-201ENST00000627671 721 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC087821.2-201ENST00000637086 450 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 SAMMSON-226ENST00000642089 1582 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SCN1BQ07699 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SCN1BQ07699 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN1BQ07699 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 AL589647.1-201ENST00000402485 466 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 AL023807.1-201ENST00000407932 359 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.04□□□□□ -1.76
SCN1BQ07699 RNA5SP345-201ENST00000410646 108 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 CHEK2P3-201ENST00000416118 248 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN1BQ07699 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 AL356276.2-201ENST00000435919 558 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC010733.1-201ENST00000451515 401 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 BX284632.1-201ENST00000478218 541 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 NCOR1P1-202ENST00000486162 291 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 RPS26P15-201ENST00000488067 348 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 RN7SL629P-201ENST00000489622 285 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 CAB39P1-201ENST00000502277 460 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.04□□□□□ -1.76
SCN1BQ07699 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.04□□□□□ -1.76
SCN1BQ07699 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.04□□□□□ -1.76
SCN1BQ07699 MIR5708-201ENST00000579723 85 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN1BQ07699 AC116651.1-201ENST00000609724 556 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN1BQ07699 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.04□□□□□ -1.76
SCN1BQ07699 AC091905.4-201ENST00000623432 202 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms