Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.23□□□□□ -1.73
SEC61A1P61619 IRF5P1-201ENST00000504852 2164 ntBASIC4.23□□□□□ -1.73
SEC61A1P61619 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SEC61A1P61619 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SEC61A1P61619 AL359922.3-201ENST00000624779 1670 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SEC61A1P61619 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A1P61619 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 INTS6P1-201ENST00000504674 2530 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC103591.2-201ENST00000265259 766 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A1P61619 Y_RNA.77-201ENST00000362962 107 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 RNU6-304P-201ENST00000364855 107 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 RNU5A-2P-201ENST00000384337 116 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 SNORA66-201ENST00000384792 133 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 MIR585-201ENST00000384887 94 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 TAF9BP1-201ENST00000396646 746 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 RNA5SP80-201ENST00000410475 111 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.22□□□□□ -1.73
SEC61A1P61619 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 MTCO1P21-201ENST00000416634 589 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.22□□□□□ -1.73
SEC61A1P61619 GAPDHP49-201ENST00000421421 961 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC073069.1-201ENST00000428657 441 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 IFNNP1-201ENST00000429219 553 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 PPIAP13-201ENST00000434706 478 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC129850.1-201ENST00000436203 508 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC092809.1-201ENST00000441469 474 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 RPS7P5-201ENST00000441482 581 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 KNOP1P3-201ENST00000446933 426 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 VN1R32P-201ENST00000452234 905 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 RNU6-1218P-201ENST00000458990 108 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 RPL7P18-201ENST00000478965 734 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC068724.1-201ENST00000487100 792 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.22□□□□□ -1.73
SEC61A1P61619 DYNLL1P6-201ENST00000503440 264 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 COX6B1P5-201ENST00000509843 249 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC010625.1-201ENST00000511296 403 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 RNA5SP43-201ENST00000516559 110 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A1P61619 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A1P61619 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 SULT1C2P2-201ENST00000562517 294 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 ATP5J2P6-201ENST00000565203 266 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A1P61619 BNIP3P26-201ENST00000600827 554 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC068790.6-201ENST00000602558 258 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 MEMO1P5-201ENST00000604810 406 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AC064872.1-201ENST00000604823 1072 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 RN7SKP299-201ENST00000606679 301 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC234782.5-201ENST00000617723 324 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 AP001784.1-201ENST00000624107 428 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 AC084035.1-201ENST00000634543 607 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 FP325313.1-201ENST00000638228 703 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 OR2L1P-202ENST00000641567 1023 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SEC61A1P61619 MTCO1P6-201ENST00000481192 1384 ntBASIC4.22□□□□□ -1.73
SEC61A1P61619 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A1P61619 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A1P61619 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A1P61619 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A1P61619 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SEC61A1P61619 AL390237.1-201ENST00000404226 1415 ntBASIC4.21□□□□□ -1.73
SEC61A1P61619 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SEC61A1P61619 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.21□□□□□ -1.74
SEC61A1P61619 MAPK10-303ENST00000641324 3959 ntBASIC4.21□□□□□ -1.74
SEC61A1P61619 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A1P61619 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SEC61A1P61619 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SEC61A1P61619 RNU1-20P-201ENST00000363314 162 ntBASIC4.21□□□□□ -1.74
SEC61A1P61619 RNU1-83P-201ENST00000363426 164 ntBASIC4.21□□□□□ -1.74
SEC61A1P61619 Y_RNA.194-201ENST00000363985 102 ntBASIC4.21□□□□□ -1.74
SEC61A1P61619 SNORD65.1-201ENST00000390889 71 ntBASIC4.21□□□□□ -1.74
SEC61A1P61619 AL590290.1-201ENST00000405336 380 ntBASIC4.21□□□□□ -1.74
SEC61A1P61619 Y_RNA.599-201ENST00000410489 109 ntBASIC4.21□□□□□ -1.74
SEC61A1P61619 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms