Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL139089.1-201ENST00000620372 975 ntBASIC3.38□□□□□ -1.87
ACTBP60709 AC011944.2-201ENST00000624440 683 ntBASIC3.38□□□□□ -1.87
ACTBP60709 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.38□□□□□ -1.87
ACTBP60709 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.38□□□□□ -1.87
ACTBP60709 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.38□□□□□ -1.87
ACTBP60709 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.38□□□□□ -1.87
ACTBP60709 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ACTBP60709 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.38□□□□□ -1.87
ACTBP60709 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ACTBP60709 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ACTBP60709 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACTBP60709 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACTBP60709 AL157700.1-201ENST00000561973 1432 ntBASIC3.37□□□□□ -1.87
ACTBP60709 AL359715.4-201ENST00000606629 1436 ntBASIC3.37□□□□□ -1.87
ACTBP60709 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACTBP60709 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
ACTBP60709 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ACTBP60709 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ACTBP60709 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACTBP60709 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACTBP60709 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.37□□□□□ -1.87
ACTBP60709 HMGB3P19-201ENST00000403971 560 ntBASIC3.37□□□□□ -1.87
ACTBP60709 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.37□□□□□ -1.87
ACTBP60709 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.37□□□□□ -1.87
ACTBP60709 RPL21P109-201ENST00000422213 475 ntBASIC3.37□□□□□ -1.87
ACTBP60709 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.37□□□□□ -1.87
ACTBP60709 ELOCP11-201ENST00000436690 332 ntBASIC3.37□□□□□ -1.87
ACTBP60709 ELOCP16-201ENST00000444494 332 ntBASIC3.37□□□□□ -1.87
ACTBP60709 RPL31P20-201ENST00000449593 360 ntBASIC3.37□□□□□ -1.87
ACTBP60709 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.37□□□□□ -1.87
ACTBP60709 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.37□□□□□ -1.87
ACTBP60709 RPL7P48-201ENST00000461513 746 ntBASIC3.37□□□□□ -1.87
ACTBP60709 AL133372.1-201ENST00000493565 745 ntBASIC3.37□□□□□ -1.87
ACTBP60709 AL035404.1-201ENST00000497982 568 ntBASIC3.37□□□□□ -1.87
ACTBP60709 AC106806.2-201ENST00000509365 500 ntBASIC3.37□□□□□ -1.87
ACTBP60709 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.37□□□□□ -1.87
ACTBP60709 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.37□□□□□ -1.87
ACTBP60709 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.37□□□□□ -1.87
ACTBP60709 AC034205.1-201ENST00000520621 638 ntBASIC3.37□□□□□ -1.87
ACTBP60709 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.37□□□□□ -1.87
ACTBP60709 OR6C73P-201ENST00000546432 358 ntBASIC3.37□□□□□ -1.87
ACTBP60709 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ACTBP60709 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.37□□□□□ -1.87
ACTBP60709 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.37□□□□□ -1.87
ACTBP60709 AC010928.3-201ENST00000587712 541 ntBASIC3.37□□□□□ -1.87
ACTBP60709 FAM60CP-201ENST00000591086 664 ntBASIC3.37□□□□□ -1.87
ACTBP60709 AC006946.3-201ENST00000609791 756 ntBASIC3.37□□□□□ -1.87
ACTBP60709 RNVU1-4-201ENST00000612985 164 ntBASIC3.37□□□□□ -1.87
ACTBP60709 AC114781.5-201ENST00000615297 108 ntBASIC3.37□□□□□ -1.87
ACTBP60709 AC007342.8-201ENST00000623278 678 ntBASIC3.37□□□□□ -1.87
ACTBP60709 ATE1-AS1-202ENST00000636460 506 ntBASIC3.37□□□□□ -1.87
ACTBP60709 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ACTBP60709 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ACTBP60709 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACTBP60709 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.37□□□□□ -1.87
ACTBP60709 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
ACTBP60709 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.37□□□□□ -1.87
ACTBP60709 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
ACTBP60709 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AP002001.2-201ENST00000529025 1469 ntBASIC3.36□□□□□ -1.87
ACTBP60709 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ACTBP60709 MIR383-201ENST00000362257 73 ntBASIC3.36□□□□□ -1.87
ACTBP60709 RNA5SP366-201ENST00000365454 123 ntBASIC3.36□□□□□ -1.87
ACTBP60709 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
ACTBP60709 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ACTBP60709 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ACTBP60709 RN7SKP182-201ENST00000410772 298 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AC004987.3-201ENST00000413879 771 ntBASIC3.36□□□□□ -1.87
ACTBP60709 RPL30P2-201ENST00000414021 291 ntBASIC3.36□□□□□ -1.87
ACTBP60709 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.36□□□□□ -1.87
ACTBP60709 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.36□□□□□ -1.87
ACTBP60709 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.36□□□□□ -1.87
ACTBP60709 OR6C71P-201ENST00000432580 913 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AC073143.1-201ENST00000436316 395 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AC083863.1-201ENST00000438811 231 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AC245517.2-201ENST00000442890 346 ntBASIC3.36□□□□□ -1.87
ACTBP60709 HMGB3P8-201ENST00000449709 577 ntBASIC3.36□□□□□ -1.87
ACTBP60709 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ACTBP60709 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.36□□□□□ -1.87
ACTBP60709 RPL38P1-201ENST00000460914 211 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AC017007.3-201ENST00000479865 435 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AC108475.1-201ENST00000507880 950 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.36□□□□□ -1.87
ACTBP60709 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.36□□□□□ -1.87
ACTBP60709 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.36□□□□□ -1.87
ACTBP60709 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.36□□□□□ -1.87
ACTBP60709 ACTR6P1-201ENST00000514311 1104 ntBASIC3.36□□□□□ -1.87
ACTBP60709 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.36□□□□□ -1.87
ACTBP60709 RNU6-1231P-201ENST00000517185 103 ntBASIC3.36□□□□□ -1.87
ACTBP60709 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.36□□□□□ -1.87
ACTBP60709 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.36□□□□□ -1.87
ACTBP60709 SUMO2P20-201ENST00000520803 283 ntBASIC3.36□□□□□ -1.87
ACTBP60709 C1GALT1P3-201ENST00000522049 819 ntBASIC3.36□□□□□ -1.87
ACTBP60709 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.36□□□□□ -1.87
ACTBP60709 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ACTBP60709 AL161729.3-201ENST00000603533 673 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AL023583.1-201ENST00000607518 1143 ntBASIC3.36□□□□□ -1.87
ACTBP60709 MIR378J-201ENST00000611988 109 ntBASIC3.36□□□□□ -1.87
ACTBP60709 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.36□□□□□ -1.87
ACTBP60709 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms