Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S2P59780 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S2P59780 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S2P59780 MIR199A2-201ENST00000385289 110 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 SNORA48.8-201ENST00000391324 134 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S2P59780 RPL23AP59-201ENST00000399415 461 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 AL590139.1-201ENST00000416267 400 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 CHEK2P5-201ENST00000423877 246 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 COX6B1P7-201ENST00000430845 235 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 MRPS18BP2-201ENST00000434310 759 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3S2P59780 AC006480.1-201ENST00000449887 378 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 AC108941.1-201ENST00000502853 530 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.25□□□□□ -1.89
AP3S2P59780 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3S2P59780 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3S2P59780 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S2P59780 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.25□□□□□ -1.89
AP3S2P59780 AC110775.1-201ENST00000513721 462 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.25□□□□□ -1.89
AP3S2P59780 AC034244.2-201ENST00000514668 858 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3S2P59780 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.25□□□□□ -1.89
AP3S2P59780 AP001636.2-201ENST00000525517 696 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 AP000676.2-201ENST00000529711 301 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3S2P59780 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3S2P59780 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
AP3S2P59780 MIR3690-201ENST00000580266 75 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 AP000919.1-202ENST00000581139 1264 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3S2P59780 PCNAP1-202ENST00000595299 752 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3S2P59780 AL163642.2-201ENST00000604722 1019 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 AC090525.3-201ENST00000605601 189 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 AL365400.2-201ENST00000605604 902 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
AP3S2P59780 AC011944.2-201ENST00000624440 683 ntBASIC3.25□□□□□ -1.89
AP3S2P59780 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S2P59780 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
AP3S2P59780 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
AP3S2P59780 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S2P59780 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S2P59780 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S2P59780 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3S2P59780 AC058791.1-201ENST00000608412 3198 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3S2P59780 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3S2P59780 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP3S2P59780 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
AP3S2P59780 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
AP3S2P59780 RNU1-75P-201ENST00000347264 129 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3S2P59780 RNU6-244P-201ENST00000391028 104 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 RN7SKP229-201ENST00000410465 302 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3S2P59780 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3S2P59780 AC241520.1-201ENST00000422654 1099 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 AL590103.1-201ENST00000434488 307 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 HMGN2P16-201ENST00000456802 261 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 VN1R17P-201ENST00000472048 1090 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 RPS27AP1-201ENST00000475545 471 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 AC093267.1-201ENST00000489176 961 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3S2P59780 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP3S2P59780 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3S2P59780 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3S2P59780 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.24□□□□□ -1.89
AP3S2P59780 RNU6-1308P-201ENST00000516817 103 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 AC087369.1-201ENST00000520775 996 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 AP000926.4-201ENST00000527351 454 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.24□□□□□ -1.89
AP3S2P59780 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.24□□□□□ -1.89
AP3S2P59780 AL121766.1-201ENST00000547436 487 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3S2P59780 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.24□□□□□ -1.89
AP3S2P59780 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3S2P59780 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.24□□□□□ -1.89
AP3S2P59780 AL392112.1-201ENST00000605115 829 ntBASIC3.24□□□□□ -1.89
AP3S2P59780 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.24□□□□□ -1.89
AP3S2P59780 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
AP3S2P59780 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3S2P59780 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
AP3S2P59780 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
AP3S2P59780 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
AP3S2P59780 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
AP3S2P59780 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP3S2P59780 AC090337.1-201ENST00000579651 2074 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
AP3S2P59780 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP3S2P59780 RNU6-600P-201ENST00000362524 99 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 SNORA51.2-201ENST00000364595 132 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP3S2P59780 RPS27AP11-201ENST00000402798 447 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3S2P59780 CKS1BP5-201ENST00000434172 273 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3S2P59780 MTCYBP12-201ENST00000440559 1134 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms