Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.75□□□□□ -1.81
LIM2P55344 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 PTGES3P2-201ENST00000407942 482 ntBASIC3.75□□□□□ -1.81
LIM2P55344 RPL7AP73-201ENST00000413490 353 ntBASIC3.75□□□□□ -1.81
LIM2P55344 AC073136.2-201ENST00000417282 849 ntBASIC3.75□□□□□ -1.81
LIM2P55344 AC023128.2-201ENST00000420880 1223 ntBASIC3.75□□□□□ -1.81
LIM2P55344 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.75□□□□□ -1.81
LIM2P55344 AC087650.1-201ENST00000431445 468 ntBASIC3.75□□□□□ -1.81
LIM2P55344 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
LIM2P55344 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.75□□□□□ -1.81
LIM2P55344 MOB1AP2-201ENST00000446060 614 ntBASIC3.75□□□□□ -1.81
LIM2P55344 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.75□□□□□ -1.81
LIM2P55344 AC069499.1-201ENST00000489433 509 ntBASIC3.75□□□□□ -1.81
LIM2P55344 PRELID3BP5-201ENST00000508612 460 ntBASIC3.75□□□□□ -1.81
LIM2P55344 RNA5SP179-201ENST00000517284 121 ntBASIC3.75□□□□□ -1.81
LIM2P55344 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.75□□□□□ -1.81
LIM2P55344 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.75□□□□□ -1.81
LIM2P55344 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.75□□□□□ -1.81
LIM2P55344 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.75□□□□□ -1.81
LIM2P55344 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.75□□□□□ -1.81
LIM2P55344 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.75□□□□□ -1.81
LIM2P55344 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.75□□□□□ -1.81
LIM2P55344 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.75□□□□□ -1.81
LIM2P55344 AC091167.4-201ENST00000605079 184 ntBASIC3.75□□□□□ -1.81
LIM2P55344 FRG1HP-204ENST00000617940 757 ntBASIC3.75□□□□□ -1.81
LIM2P55344 AC009704.2-201ENST00000618739 483 ntBASIC3.75□□□□□ -1.81
LIM2P55344 AC103858.2-201ENST00000621471 543 ntBASIC3.75□□□□□ -1.81
LIM2P55344 CR392039.4-201ENST00000624968 501 ntBASIC3.75□□□□□ -1.81
LIM2P55344 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.75□□□□□ -1.81
LIM2P55344 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.75□□□□□ -1.81
LIM2P55344 MFSD8-220ENST00000641243 1422 ntBASIC3.75□□□□□ -1.81
LIM2P55344 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
LIM2P55344 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
LIM2P55344 AC134882.1-201ENST00000603738 1676 ntBASIC3.75□□□□□ -1.81
LIM2P55344 BDP1P-201ENST00000582658 1990 ntBASIC3.74□□□□□ -1.81
LIM2P55344 AL592437.2-201ENST00000421655 2434 ntBASIC3.74□□□□□ -1.81
LIM2P55344 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIM2P55344 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.74□□□□□ -1.81
LIM2P55344 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIM2P55344 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LIM2P55344 SNORD56.4-201ENST00000363883 71 ntBASIC3.74□□□□□ -1.81
LIM2P55344 RNA5SP283-201ENST00000365604 119 ntBASIC3.74□□□□□ -1.81
LIM2P55344 AC019155.1-201ENST00000382242 574 ntBASIC3.74□□□□□ -1.81
LIM2P55344 RNU6-796P-201ENST00000391086 107 ntBASIC3.74□□□□□ -1.81
LIM2P55344 ATP5F1P6-201ENST00000402768 767 ntBASIC3.74□□□□□ -1.81
LIM2P55344 RPL31P52-201ENST00000407532 367 ntBASIC3.74□□□□□ -1.81
LIM2P55344 RNU4-27P-201ENST00000410889 139 ntBASIC3.74□□□□□ -1.81
LIM2P55344 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIM2P55344 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.74□□□□□ -1.81
LIM2P55344 UBE2D3P3-201ENST00000426992 425 ntBASIC3.74□□□□□ -1.81
LIM2P55344 AC083863.1-201ENST00000438811 231 ntBASIC3.74□□□□□ -1.81
LIM2P55344 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.74□□□□□ -1.81
LIM2P55344 AL356535.1-201ENST00000440335 398 ntBASIC3.74□□□□□ -1.81
LIM2P55344 RPL7P55-201ENST00000450522 746 ntBASIC3.74□□□□□ -1.81
LIM2P55344 RPL37P3-201ENST00000456825 293 ntBASIC3.74□□□□□ -1.81
LIM2P55344 RPL23AP2-201ENST00000471227 466 ntBASIC3.74□□□□□ -1.81
LIM2P55344 MTND6P6-201ENST00000478031 263 ntBASIC3.74□□□□□ -1.81
LIM2P55344 MTCO2P9-201ENST00000503214 694 ntBASIC3.74□□□□□ -1.81
LIM2P55344 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 FTH1P21-201ENST00000512179 511 ntBASIC3.74□□□□□ -1.81
LIM2P55344 IGKV2-36-201ENST00000519999 223 ntBASIC3.74□□□□□ -1.81
LIM2P55344 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.74□□□□□ -1.81
LIM2P55344 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.74□□□□□ -1.81
LIM2P55344 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.74□□□□□ -1.81
LIM2P55344 YPEL5P3-201ENST00000547227 352 ntBASIC3.74□□□□□ -1.81
LIM2P55344 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.74□□□□□ -1.81
LIM2P55344 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.74□□□□□ -1.81
LIM2P55344 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIM2P55344 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIM2P55344 AC068790.5-201ENST00000602741 355 ntBASIC3.74□□□□□ -1.81
LIM2P55344 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.74□□□□□ -1.81
LIM2P55344 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 AL591424.2-201ENST00000617023 128 ntBASIC3.74□□□□□ -1.81
LIM2P55344 STMN1P1-201ENST00000617809 440 ntBASIC3.74□□□□□ -1.81
LIM2P55344 AL139089.1-201ENST00000620372 975 ntBASIC3.74□□□□□ -1.81
LIM2P55344 MIR6500-201ENST00000622700 86 ntBASIC3.74□□□□□ -1.81
LIM2P55344 AC016717.3-201ENST00000624730 554 ntBASIC3.74□□□□□ -1.81
LIM2P55344 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIM2P55344 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LIM2P55344 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIM2P55344 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIM2P55344 SEC63P2-201ENST00000503863 1939 ntBASIC3.74□□□□□ -1.81
LIM2P55344 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIM2P55344 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LIM2P55344 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms