Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LIMK1P53667 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LIMK1P53667 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
LIMK1P53667 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LIMK1P53667 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LIMK1P53667 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIMK1P53667 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIMK1P53667 AC095050.2-201ENST00000510748 1458 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LIMK1P53667 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LIMK1P53667 MIR372-201ENST00000362225 67 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 RNU1-132P-201ENST00000364300 164 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 RNA5SP513-201ENST00000364648 118 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 MIR659-201ENST00000384963 97 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 MIR449B-201ENST00000384995 97 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 SNORD65C-201ENST00000390962 71 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.46□□□□□ -1.7
LIMK1P53667 U3.35-201ENST00000408405 208 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 RNU6ATAC-201ENST00000408749 126 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AL024507.1-201ENST00000412741 274 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AC004987.3-201ENST00000413879 771 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 UBE2V1P9-201ENST00000414760 368 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.46□□□□□ -1.7
LIMK1P53667 COX6CP15-201ENST00000426313 211 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.46□□□□□ -1.7
LIMK1P53667 FABP5P3-201ENST00000437960 408 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.46□□□□□ -1.7
LIMK1P53667 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.46□□□□□ -1.7
LIMK1P53667 AC073052.1-201ENST00000440417 714 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 RPL21P89-201ENST00000444021 467 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AC008280.2-201ENST00000455473 307 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.46□□□□□ -1.7
LIMK1P53667 RPL23AP2-201ENST00000471227 466 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.46□□□□□ -1.7
LIMK1P53667 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.46□□□□□ -1.7
LIMK1P53667 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.46□□□□□ -1.7
LIMK1P53667 Vault.1-201ENST00000516474 102 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.46□□□□□ -1.7
LIMK1P53667 AC008562.1-201ENST00000521763 330 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.46□□□□□ -1.7
LIMK1P53667 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LIMK1P53667 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.46□□□□□ -1.7
LIMK1P53667 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.46□□□□□ -1.7
LIMK1P53667 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.46□□□□□ -1.7
LIMK1P53667 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.46□□□□□ -1.7
LIMK1P53667 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.46□□□□□ -1.7
LIMK1P53667 CYP2C60P-201ENST00000566088 139 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AC023824.3-201ENST00000569003 562 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AC090666.1-201ENST00000578241 445 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AC008507.2-201ENST00000588402 1176 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.46□□□□□ -1.7
LIMK1P53667 NTAN1P1-201ENST00000603150 646 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AC124016.2-201ENST00000610058 665 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AL049777.1-201ENST00000622740 518 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.46□□□□□ -1.7
LIMK1P53667 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.46□□□□□ -1.7
LIMK1P53667 AL590396.4-201ENST00000636779 956 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.46□□□□□ -1.7
LIMK1P53667 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.46□□□□□ -1.7
LIMK1P53667 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LIMK1P53667 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LIMK1P53667 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIMK1P53667 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIMK1P53667 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIMK1P53667 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIMK1P53667 AC008725.1-201ENST00000605123 2263 ntBASIC4.46□□□□□ -1.7
LIMK1P53667 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.46□□□□□ -1.7
LIMK1P53667 ERCC6-202ENST00000374127 1782 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LIMK1P53667 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.45□□□□□ -1.7
LIMK1P53667 RNU1-20P-201ENST00000363314 162 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC234772.1-201ENST00000377927 937 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.45□□□□□ -1.7
LIMK1P53667 MIR153-1-201ENST00000384914 90 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 MIR200C-201ENST00000384980 68 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 MIR620-201ENST00000385232 95 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 RNU6-1000P-201ENST00000391066 106 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.45□□□□□ -1.7
LIMK1P53667 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIMK1P53667 RGS17P1-201ENST00000423358 553 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AL117339.2-201ENST00000430475 180 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.45□□□□□ -1.7
LIMK1P53667 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.45□□□□□ -1.7
LIMK1P53667 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.45□□□□□ -1.7
LIMK1P53667 AC092809.1-201ENST00000441469 474 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC005002.1-201ENST00000447458 540 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.45□□□□□ -1.7
LIMK1P53667 AL121877.1-201ENST00000453704 622 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC093166.2-201ENST00000455969 1017 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC096992.1-201ENST00000459808 709 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC053481.1-201ENST00000467217 306 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.45□□□□□ -1.7
LIMK1P53667 AC092045.1-201ENST00000495716 1231 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC098799.3-201ENST00000506095 438 ntBASIC4.45□□□□□ -1.7
LIMK1P53667 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.45□□□□□ -1.7
LIMK1P53667 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms