Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RNA5SP383-201ENST00000362934 120 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 AC068538.1-201ENST00000376856 336 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR2JP52435 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.25□□□□□ -1.89
POLR2JP52435 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR2JP52435 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
POLR2JP52435 DPY19L1P2-201ENST00000426647 915 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR2JP52435 HMGB3P11-201ENST00000440127 604 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR2JP52435 AC125238.1-201ENST00000448842 249 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 U3.44-201ENST00000458938 192 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 RPL21P71-201ENST00000465598 459 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 AC108078.3-201ENST00000502633 489 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR2JP52435 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.25□□□□□ -1.89
POLR2JP52435 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.25□□□□□ -1.89
POLR2JP52435 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.25□□□□□ -1.89
POLR2JP52435 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR2JP52435 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
POLR2JP52435 AC009948.4-201ENST00000604692 675 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 OR6R2P-201ENST00000609216 300 ntBASIC3.25□□□□□ -1.89
POLR2JP52435 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.25□□□□□ -1.89
POLR2JP52435 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
POLR2JP52435 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
POLR2JP52435 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
POLR2JP52435 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
POLR2JP52435 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.24□□□□□ -1.89
POLR2JP52435 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR2JP52435 NAMPTP1-201ENST00000440465 2514 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 AC100871.1-201ENST00000507871 1456 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
POLR2JP52435 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 RNA5SP293-201ENST00000410527 113 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 RSL24D1P6-201ENST00000426934 401 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR2JP52435 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR2JP52435 RPL23AP22-201ENST00000437556 453 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR2JP52435 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR2JP52435 SNORD105B-201ENST00000458770 79 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
POLR2JP52435 AC021146.5-201ENST00000503544 545 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
POLR2JP52435 TXNP6-201ENST00000510190 310 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR2JP52435 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.24□□□□□ -1.89
POLR2JP52435 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR2JP52435 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.24□□□□□ -1.89
POLR2JP52435 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR2JP52435 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR2JP52435 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
POLR2JP52435 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR2JP52435 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.24□□□□□ -1.89
POLR2JP52435 AC020914.6-201ENST00000594327 272 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 AL391497.1-201ENST00000608671 547 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 AC083809.1-201ENST00000615051 472 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.24□□□□□ -1.89
POLR2JP52435 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
POLR2JP52435 MTND5P23-201ENST00000430812 1655 ntBASIC3.24□□□□□ -1.89
POLR2JP52435 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR2JP52435 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.23□□□□□ -1.89
POLR2JP52435 AC006042.3-201ENST00000454684 1469 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR2JP52435 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR2JP52435 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR2JP52435 RNA5SP239-201ENST00000410218 129 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 AC009237.5-201ENST00000414271 501 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 AL035423.1-201ENST00000420331 213 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 RPL7P2-201ENST00000427639 268 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 C4BPAP2-201ENST00000428434 478 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.23□□□□□ -1.89
POLR2JP52435 HMGB3P8-201ENST00000449709 577 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
POLR2JP52435 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
POLR2JP52435 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
POLR2JP52435 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR2JP52435 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR2JP52435 AC068446.3-201ENST00000555285 382 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 AC007224.1-201ENST00000564410 144 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR2JP52435 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR2JP52435 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR2JP52435 AC022916.3-201ENST00000592961 742 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 AC006557.5-201ENST00000603126 811 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 AC099669.2-201ENST00000616549 437 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
POLR2JP52435 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
POLR2JP52435 AL645937.1-201ENST00000641739 1652 ntBASIC3.23□□□□□ -1.89
POLR2JP52435 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR2JP52435 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.23□□□□□ -1.89
POLR2JP52435 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.22□□□□□ -1.89
POLR2JP52435 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
POLR2JP52435 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR2JP52435 AC106871.1-201ENST00000568324 3102 ntBASIC3.22□□□□□ -1.89
POLR2JP52435 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR2JP52435 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR2JP52435 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms