Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRCA2P51587 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.64□□□□□ -1.83
BRCA2P51587 RPS17P11-201ENST00000474297 293 ntBASIC3.64□□□□□ -1.83
BRCA2P51587 RPL7P47-201ENST00000497299 556 ntBASIC3.64□□□□□ -1.83
BRCA2P51587 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.64□□□□□ -1.83
BRCA2P51587 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
BRCA2P51587 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BRCA2P51587 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRCA2P51587 RNA5SP42-201ENST00000364278 115 ntBASIC3.64□□□□□ -1.83
BRCA2P51587 SNORA70B-201ENST00000384210 135 ntBASIC3.64□□□□□ -1.83
BRCA2P51587 snoU13.26-201ENST00000459452 105 ntBASIC3.64□□□□□ -1.83
BRCA2P51587 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.64□□□□□ -1.83
BRCA2P51587 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BRCA2P51587 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.64□□□□□ -1.83
BRCA2P51587 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.64□□□□□ -1.83
BRCA2P51587 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.64□□□□□ -1.83
BRCA2P51587 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC3.64□□□□□ -1.83
BRCA2P51587 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC3.64□□□□□ -1.83
BRCA2P51587 Z83843.1-201ENST00000604070 3685 ntBASIC3.64□□□□□ -1.83
BRCA2P51587 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRCA2P51587 RSL24D1P4-201ENST00000400938 484 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 AC126389.1-201ENST00000477436 290 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 AC006946.3-201ENST00000609791 756 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
BRCA2P51587 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BRCA2P51587 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
BRCA2P51587 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
BRCA2P51587 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRCA2P51587 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
BRCA2P51587 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BRCA2P51587 ATP5F1P6-201ENST00000402768 767 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 AC007899.1-201ENST00000412776 775 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 AL513174.1-201ENST00000423182 629 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 BX276092.3-201ENST00000424182 230 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC3.63□□□□□ -1.83
BRCA2P51587 AC068724.1-201ENST00000487100 792 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.63□□□□□ -1.83
BRCA2P51587 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.63□□□□□ -1.83
BRCA2P51587 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.63□□□□□ -1.83
BRCA2P51587 MIR4425-201ENST00000580572 84 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.63□□□□□ -1.83
BRCA2P51587 AC091905.1-201ENST00000624400 311 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
BRCA2P51587 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BRCA2P51587 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.63□□□□□ -1.83
BRCA2P51587 TRBV12-2-201ENST00000489763 344 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 OR4R3P-201ENST00000525084 838 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 AC064859.1-201ENST00000624741 174 ntBASIC3.63□□□□□ -1.83
BRCA2P51587 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 CR383658.2-201ENST00000547576 1525 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
BRCA2P51587 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
BRCA2P51587 RPS24P12-201ENST00000402084 394 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.62□□□□□ -1.83
BRCA2P51587 AC093156.1-201ENST00000440382 670 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 IFNA11P-201ENST00000446352 526 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 DEFB109F-201ENST00000491870 277 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 AP004607.9-201ENST00000618202 316 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
BRCA2P51587 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC3.62□□□□□ -1.83
BRCA2P51587 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.62□□□□□ -1.83
BRCA2P51587 AC009963.1-201ENST00000417265 157 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 MYL8P-204ENST00000431574 518 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.62□□□□□ -1.83
BRCA2P51587 snoU13.23-201ENST00000458863 104 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 HMGB3P13-201ENST00000511263 607 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 AL133457.1-201ENST00000564251 987 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.62□□□□□ -1.83
BRCA2P51587 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 AC104446.1-201ENST00000613728 1321 ntBASIC3.62□□□□□ -1.83
BRCA2P51587 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRCA2P51587 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.62□□□□□ -1.83
BRCA2P51587 SNORA7.4-201ENST00000384249 137 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.61□□□□□ -1.83
BRCA2P51587 RPL7P12-201ENST00000446719 750 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BRCA2P51587 SETP12-201ENST00000514068 805 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 RNU6-991P-201ENST00000516168 107 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.61□□□□□ -1.83
BRCA2P51587 AC243829.7-201ENST00000633081 225 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.61□□□□□ -1.83
BRCA2P51587 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BRCA2P51587 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC3.61□□□□□ -1.83
BRCA2P51587 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.61□□□□□ -1.83
BRCA2P51587 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
BRCA2P51587 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BRCA2P51587 AC092435.4-201ENST00000623012 4159 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.61□□□□□ -1.83
BRCA2P51587 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
BRCA2P51587 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
BRCA2P51587 MRPL50P2-201ENST00000416821 482 ntBASIC3.61□□□□□ -1.83
BRCA2P51587 CBX1P4-201ENST00000439415 457 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms