Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP9P49458 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.35□□□□□ -1.87
SRP9P49458 AP001180.3-201ENST00000582221 145 ntBASIC3.35□□□□□ -1.87
SRP9P49458 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP9P49458 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP9P49458 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.35□□□□□ -1.87
SRP9P49458 SNX6P1-201ENST00000601728 1224 ntBASIC3.35□□□□□ -1.87
SRP9P49458 AL592295.2-201ENST00000612578 206 ntBASIC3.35□□□□□ -1.87
SRP9P49458 MIR6798-201ENST00000612887 67 ntBASIC3.35□□□□□ -1.87
SRP9P49458 RNVU1-4-201ENST00000612985 164 ntBASIC3.35□□□□□ -1.87
SRP9P49458 AC099669.2-201ENST00000616549 437 ntBASIC3.35□□□□□ -1.87
SRP9P49458 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.35□□□□□ -1.87
SRP9P49458 RNA5SP196-201ENST00000625967 102 ntBASIC3.35□□□□□ -1.87
SRP9P49458 ATE1-AS1-202ENST00000636460 506 ntBASIC3.35□□□□□ -1.87
SRP9P49458 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SRP9P49458 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.35□□□□□ -1.87
SRP9P49458 ZNF542P-204ENST00000482727 1305 ntBASIC3.35□□□□□ -1.87
SRP9P49458 AC119744.1-201ENST00000454746 1715 ntBASIC3.35□□□□□ -1.87
SRP9P49458 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SRP9P49458 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
SRP9P49458 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SRP9P49458 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.35□□□□□ -1.87
SRP9P49458 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRP9P49458 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SRP9P49458 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SRP9P49458 CDY3P-201ENST00000454543 1618 ntBASIC3.34□□□□□ -1.87
SRP9P49458 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SRP9P49458 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SRP9P49458 MIR372-201ENST00000362225 67 ntBASIC3.34□□□□□ -1.87
SRP9P49458 RNA5SP283-201ENST00000365604 119 ntBASIC3.34□□□□□ -1.87
SRP9P49458 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.34□□□□□ -1.87
SRP9P49458 ZNF602P-201ENST00000405929 924 ntBASIC3.34□□□□□ -1.87
SRP9P49458 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP9P49458 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SRP9P49458 RANP8-201ENST00000444720 713 ntBASIC3.34□□□□□ -1.87
SRP9P49458 RPL12P26-201ENST00000452430 487 ntBASIC3.34□□□□□ -1.87
SRP9P49458 AC098824.1-201ENST00000453565 980 ntBASIC3.34□□□□□ -1.87
SRP9P49458 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.34□□□□□ -1.87
SRP9P49458 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.34□□□□□ -1.87
SRP9P49458 TRBV8-1-201ENST00000481590 279 ntBASIC3.34□□□□□ -1.87
SRP9P49458 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP9P49458 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP9P49458 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP9P49458 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP9P49458 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.34□□□□□ -1.87
SRP9P49458 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP9P49458 MIR4738-201ENST00000579134 87 ntBASIC3.34□□□□□ -1.87
SRP9P49458 AC053481.4-201ENST00000583164 216 ntBASIC3.34□□□□□ -1.87
SRP9P49458 SS18L2P2-201ENST00000583960 235 ntBASIC3.34□□□□□ -1.87
SRP9P49458 GMCL1P2-201ENST00000605230 823 ntBASIC3.34□□□□□ -1.87
SRP9P49458 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
SRP9P49458 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.34□□□□□ -1.87
SRP9P49458 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.34□□□□□ -1.87
SRP9P49458 AL133383.2-201ENST00000622958 2336 ntBASIC3.34□□□□□ -1.87
SRP9P49458 DCAF13P3-201ENST00000561147 1334 ntBASIC3.34□□□□□ -1.87
SRP9P49458 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SRP9P49458 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
SRP9P49458 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SRP9P49458 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.34□□□□□ -1.88
SRP9P49458 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SRP9P49458 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SRP9P49458 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SRP9P49458 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.33□□□□□ -1.88
SRP9P49458 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SRP9P49458 AC091152.2-201ENST00000591628 2569 ntBASIC3.33□□□□□ -1.88
SRP9P49458 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SRP9P49458 CASC19-284ENST00000642142 1868 ntBASIC3.33□□□□□ -1.88
SRP9P49458 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SRP9P49458 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SRP9P49458 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.33□□□□□ -1.88
SRP9P49458 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
SRP9P49458 RNU6-225P-201ENST00000384613 103 ntBASIC3.33□□□□□ -1.88
SRP9P49458 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SRP9P49458 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.33□□□□□ -1.88
SRP9P49458 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SRP9P49458 AC114814.2-201ENST00000419195 485 ntBASIC3.33□□□□□ -1.88
SRP9P49458 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SRP9P49458 RPL7P2-201ENST00000427639 268 ntBASIC3.33□□□□□ -1.88
SRP9P49458 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
SRP9P49458 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.33□□□□□ -1.88
SRP9P49458 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP9P49458 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SRP9P49458 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.33□□□□□ -1.88
SRP9P49458 RN7SKP21-201ENST00000516503 220 ntBASIC3.33□□□□□ -1.88
SRP9P49458 RNA5SP164-201ENST00000516533 110 ntBASIC3.33□□□□□ -1.88
SRP9P49458 SUMO2P20-201ENST00000520803 283 ntBASIC3.33□□□□□ -1.88
SRP9P49458 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP9P49458 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
SRP9P49458 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP9P49458 NPM1P47-201ENST00000560843 856 ntBASIC3.33□□□□□ -1.88
SRP9P49458 MIR3160-1-201ENST00000577972 85 ntBASIC3.33□□□□□ -1.88
SRP9P49458 VN1R85P-201ENST00000601587 426 ntBASIC3.33□□□□□ -1.88
SRP9P49458 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP9P49458 AC115621.1-201ENST00000604653 858 ntBASIC3.33□□□□□ -1.88
SRP9P49458 AC090912.3-201ENST00000609775 533 ntBASIC3.33□□□□□ -1.88
SRP9P49458 MIR6875-201ENST00000617506 72 ntBASIC3.33□□□□□ -1.88
SRP9P49458 MIR4278-201ENST00000636094 69 ntBASIC3.33□□□□□ -1.88
SRP9P49458 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.33□□□□□ -1.88
SRP9P49458 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SRP9P49458 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms