Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 OR52A4P-201ENST00000472867 958 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 RN7SL817P-201ENST00000480777 288 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 VPS26AP1-201ENST00000483197 979 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 AC090013.1-201ENST00000485147 480 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN9P43378 AC119751.5-201ENST00000514077 770 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 TCP11X3P-202ENST00000514289 1254 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN9P43378 AC134698.5-201ENST00000519444 336 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN9P43378 AP001636.2-201ENST00000525517 696 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN9P43378 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PTPN9P43378 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN9P43378 AADACP1-206ENST00000561502 1193 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN9P43378 VN1R78P-201ENST00000597393 564 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 MRPS35P3-201ENST00000603189 709 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.68□□□□□ -1.66
PTPN9P43378 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN9P43378 CR392039.4-201ENST00000624968 501 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 AC006065.6-201ENST00000625201 545 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN9P43378 OR2L1P-202ENST00000641567 1023 ntBASIC4.68□□□□□ -1.66
PTPN9P43378 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN9P43378 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN9P43378 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN9P43378 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PTPN9P43378 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN9P43378 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PTPN9P43378 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PTPN9P43378 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN9P43378 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PTPN9P43378 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 DBF4P1-201ENST00000412976 1892 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN9P43378 RNA5SP307-201ENST00000362863 116 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 RNU6-560P-201ENST00000364007 108 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 SNORD116.1-201ENST00000365628 92 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 SNORA11B-201ENST00000408175 129 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 SNORA74C-2-201ENST00000411179 201 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN9P43378 MTCO1P54-201ENST00000430139 712 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN9P43378 AL138878.2-201ENST00000440581 1241 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 MTATP6P26-201ENST00000445926 662 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 HMGB1P16-201ENST00000447155 540 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 RPS27AP15-201ENST00000447672 466 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 AC079776.3-201ENST00000450665 370 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 VN1R32P-201ENST00000452234 905 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 DDX39BP2-208ENST00000453923 258 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN9P43378 RPS27P23-201ENST00000487608 251 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.67□□□□□ -1.66
PTPN9P43378 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.67□□□□□ -1.66
PTPN9P43378 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 GSTP1P1-201ENST00000548078 319 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.67□□□□□ -1.66
PTPN9P43378 AC084783.1-201ENST00000565846 910 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 RN7SL176P-201ENST00000580352 264 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN9P43378 DUXAP3-201ENST00000603616 594 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN9P43378 AP000255.1-201ENST00000610276 676 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN9P43378 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 AC090017.1-201ENST00000548612 1779 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 AC012618.3-205ENST00000637896 1496 ntBASIC4.67□□□□□ -1.66
PTPN9P43378 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN9P43378 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PTPN9P43378 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN9P43378 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN9P43378 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.66□□□□□ -1.66
PTPN9P43378 MAPK10-304ENST00000641341 3984 ntBASIC4.66□□□□□ -1.66
PTPN9P43378 AC018529.3-201ENST00000624212 2254 ntBASIC4.66□□□□□ -1.66
PTPN9P43378 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN9P43378 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN9P43378 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PTPN9P43378 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN9P43378 MFSD8-242ENST00000641690 4199 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms