Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC6A4P31645 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC6A4P31645 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 RNA5SP191-201ENST00000362585 102 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 U3.4-201ENST00000363352 213 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 RNU4-91P-201ENST00000364778 135 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SLC6A4P31645 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 MIR1284-201ENST00000408337 120 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC6A4P31645 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC6A4P31645 RN7SKP142-201ENST00000411236 328 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 PGBD4P8-201ENST00000412993 562 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 LINC00993-201ENST00000420453 540 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 DYNLL1P7-201ENST00000429273 258 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AL049745.1-201ENST00000433953 286 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AP000936.3-201ENST00000438127 255 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 MTCO1P19-201ENST00000443487 500 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 RPL21P133-201ENST00000443666 476 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC6A4P31645 RPL36AP33-201ENST00000450395 310 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC022431.1-201ENST00000450941 438 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC063943.1-201ENST00000465434 453 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 RPL21P71-201ENST00000465598 459 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 FTH1P2-201ENST00000466086 412 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC6A4P31645 RNU6-1261P-201ENST00000517194 104 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 MTND1P5-201ENST00000517906 940 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AP002963.1-201ENST00000530590 184 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 TVP23CP2-201ENST00000571473 623 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC090181.2-201ENST00000602975 672 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AC004987.4-201ENST00000603383 338 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 MTCYBP22-201ENST00000603788 447 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AC243756.2-201ENST00000618406 463 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AC092650.2-201ENST00000619984 902 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC026634.1-201ENST00000634369 198 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AC006927.3-201ENST00000638789 384 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.09□□□□□ -1.6
SLC6A4P31645 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
SLC6A4P31645 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC6A4P31645 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC6A4P31645 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SLC6A4P31645 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC6A4P31645 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SLC6A4P31645 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
SLC6A4P31645 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC6A4P31645 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC6A4P31645 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC6A4P31645 CASC19-204ENST00000641001 2055 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SLC6A4P31645 Z95331.1-201ENST00000623075 23112 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC6A4P31645 RNA5SP87-201ENST00000384155 118 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC6A4P31645 CYCSP45-201ENST00000402289 315 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 AL357515.1-201ENST00000402967 542 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 RNU2-65P-201ENST00000410162 185 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 RNU2-16P-201ENST00000410712 136 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC6A4P31645 TBCAP2-201ENST00000416175 326 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 MTCO1P21-201ENST00000416634 589 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 AL807761.1-201ENST00000417622 171 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 AC062016.2-201ENST00000420950 676 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC6A4P31645 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC6A4P31645 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC6A4P31645 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC6A4P31645 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC6A4P31645 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC6A4P31645 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC6A4P31645 AP000936.2-201ENST00000447151 681 ntBASIC5.08□□□□□ -1.6
SLC6A4P31645 AC000111.2-201ENST00000448200 210 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms