Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 RNU1-87P-201ENST00000363727 170 ntBASIC4.29□□□□□ -1.72
CDH3P22223 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 MTND4P11-201ENST00000417020 1058 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 Z74021.1-201ENST00000423610 407 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 RPS29P17-201ENST00000430795 166 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH3P22223 AC004854.1-201ENST00000440356 349 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC068135.1-201ENST00000446164 246 ntBASIC4.29□□□□□ -1.72
CDH3P22223 OR51B8P-201ENST00000449892 769 ntBASIC4.29□□□□□ -1.72
CDH3P22223 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 SNRPGP5-201ENST00000456003 220 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH3P22223 snoU109.3-201ENST00000459477 145 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC104164.3-201ENST00000467363 1258 ntBASIC4.29□□□□□ -1.72
CDH3P22223 RN7SL385P-201ENST00000468873 276 ntBASIC4.29□□□□□ -1.72
CDH3P22223 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH3P22223 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH3P22223 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH3P22223 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH3P22223 POLR2KP1-201ENST00000553226 168 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH3P22223 MIR4697-201ENST00000582977 78 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC008759.1-201ENST00000589783 983 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC067852.4-201ENST00000590314 478 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 AL022067.1-201ENST00000602426 454 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC125494.3-201ENST00000602759 455 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC103792.1-201ENST00000603591 919 ntBASIC4.29□□□□□ -1.72
CDH3P22223 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 AC093673.2-201ENST00000609674 331 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC103858.2-201ENST00000621471 543 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC024595.1-201ENST00000623088 387 ntBASIC4.29□□□□□ -1.72
CDH3P22223 AC015726.3-201ENST00000624501 418 ntBASIC4.29□□□□□ -1.72
CDH3P22223 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH3P22223 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH3P22223 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH3P22223 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 AC006042.3-201ENST00000454684 1469 ntBASIC4.29□□□□□ -1.72
CDH3P22223 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 NXPH1-205ENST00000602349 1953 ntBASIC4.29□□□□□ -1.72
CDH3P22223 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH3P22223 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH3P22223 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH3P22223 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH3P22223 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CDH3P22223 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH3P22223 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH3P22223 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDH3P22223 DCAF13P3-201ENST00000561147 1334 ntBASIC4.28□□□□□ -1.72
CDH3P22223 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH3P22223 AP000568.1-201ENST00000282964 442 ntBASIC4.28□□□□□ -1.72
CDH3P22223 OR5P1P-201ENST00000299512 925 ntBASIC4.28□□□□□ -1.72
CDH3P22223 RNU1-130P-201ENST00000363930 160 ntBASIC4.28□□□□□ -1.72
CDH3P22223 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.28□□□□□ -1.72
CDH3P22223 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDH3P22223 AL049693.1-201ENST00000402760 611 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AC092638.1-201ENST00000411966 1275 ntBASIC4.28□□□□□ -1.72
CDH3P22223 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH3P22223 RPS12P23-201ENST00000419579 400 ntBASIC4.28□□□□□ -1.72
CDH3P22223 CHIAP3-201ENST00000423668 1133 ntBASIC4.28□□□□□ -1.72
CDH3P22223 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH3P22223 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH3P22223 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH3P22223 CBX1P4-201ENST00000439415 457 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH3P22223 SEPT14P24-201ENST00000447236 180 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AC053481.1-201ENST00000467217 306 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AC109327.1-201ENST00000471666 403 ntBASIC4.28□□□□□ -1.72
CDH3P22223 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH3P22223 GTF2IP9-201ENST00000502460 301 ntBASIC4.28□□□□□ -1.72
CDH3P22223 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.28□□□□□ -1.72
CDH3P22223 AC025674.1-201ENST00000507074 324 ntBASIC4.28□□□□□ -1.72
CDH3P22223 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH3P22223 AC008565.1-201ENST00000509046 885 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH3P22223 AC110760.3-202ENST00000515177 371 ntBASIC4.28□□□□□ -1.72
CDH3P22223 SNORA19.3-201ENST00000516165 130 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH3P22223 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH3P22223 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH3P22223 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.28□□□□□ -1.72
CDH3P22223 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH3P22223 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH3P22223 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH3P22223 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH3P22223 VN1R79P-201ENST00000593540 513 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AL050303.3-201ENST00000613704 284 ntBASIC4.28□□□□□ -1.72
CDH3P22223 MLECP1-201ENST00000615893 709 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AC091905.2-201ENST00000623143 306 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AL359715.5-201ENST00000623431 443 ntBASIC4.28□□□□□ -1.72
CDH3P22223 AC011944.2-201ENST00000624440 683 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms