Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL121877.1-201ENST00000453704 622 ntBASIC3.57□□□□□ -1.84
HMGA1P17096 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.57□□□□□ -1.84
HMGA1P17096 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGA1P17096 AC010307.1-201ENST00000467206 836 ntBASIC3.57□□□□□ -1.84
HMGA1P17096 PROS2P-201ENST00000474651 1951 ntBASIC3.57□□□□□ -1.84
HMGA1P17096 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGA1P17096 AC010285.3-201ENST00000511668 676 ntBASIC3.57□□□□□ -1.84
HMGA1P17096 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.57□□□□□ -1.84
HMGA1P17096 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGA1P17096 OR5AP1P-201ENST00000529730 940 ntBASIC3.57□□□□□ -1.84
HMGA1P17096 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HMGA1P17096 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGA1P17096 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGA1P17096 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.57□□□□□ -1.84
HMGA1P17096 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGA1P17096 AC032011.1-201ENST00000611703 1549 ntBASIC3.57□□□□□ -1.84
HMGA1P17096 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HMGA1P17096 AC000123.3-201ENST00000624029 4975 ntBASIC3.57□□□□□ -1.84
HMGA1P17096 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGA1P17096 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HMGA1P17096 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA1P17096 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGA1P17096 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA1P17096 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGA1P17096 CDY11P-201ENST00000447168 1651 ntBASIC3.56□□□□□ -1.84
HMGA1P17096 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA1P17096 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA1P17096 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA1P17096 RPL17P50-201ENST00000396131 546 ntBASIC3.56□□□□□ -1.84
HMGA1P17096 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGA1P17096 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGA1P17096 RPS29P31-201ENST00000446147 164 ntBASIC3.56□□□□□ -1.84
HMGA1P17096 Z75741.1-201ENST00000446793 314 ntBASIC3.56□□□□□ -1.84
HMGA1P17096 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA1P17096 RPL23AP71-201ENST00000470966 469 ntBASIC3.56□□□□□ -1.84
HMGA1P17096 RPS3AP50-201ENST00000487064 803 ntBASIC3.56□□□□□ -1.84
HMGA1P17096 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.56□□□□□ -1.84
HMGA1P17096 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.56□□□□□ -1.84
HMGA1P17096 OR4R3P-201ENST00000525084 838 ntBASIC3.56□□□□□ -1.84
HMGA1P17096 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.56□□□□□ -1.84
HMGA1P17096 UBE2NP1-201ENST00000545592 458 ntBASIC3.56□□□□□ -1.84
HMGA1P17096 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.56□□□□□ -1.84
HMGA1P17096 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGA1P17096 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGA1P17096 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.56□□□□□ -1.84
HMGA1P17096 AL354976.1-201ENST00000613843 387 ntBASIC3.56□□□□□ -1.84
HMGA1P17096 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA1P17096 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 CR381670.1-201ENST00000624291 1693 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGA1P17096 AL132656.3-201ENST00000606384 1595 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
HMGA1P17096 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
HMGA1P17096 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 RNA5SP197-201ENST00000363357 119 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 BMS1P3-201ENST00000372011 932 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGA1P17096 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGA1P17096 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGA1P17096 AC021678.1-201ENST00000505195 936 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 RFPL4AP5-201ENST00000514977 504 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 AC109635.6-201ENST00000525487 1113 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGA1P17096 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGA1P17096 AC005476.1-201ENST00000554427 397 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 MIR4276-201ENST00000584832 70 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 AC020914.4-201ENST00000597690 277 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 AC006557.5-201ENST00000603126 811 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 MIR8057-201ENST00000620957 69 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 AC022149.2-201ENST00000621061 203 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGA1P17096 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 AP001002.2-201ENST00000625137 386 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGA1P17096 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HMGA1P17096 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.55□□□□□ -1.84
HMGA1P17096 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HMGA1P17096 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGA1P17096 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGA1P17096 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HMGA1P17096 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 Z83843.1-201ENST00000604070 3685 ntBASIC3.55□□□□□ -1.84
HMGA1P17096 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA1P17096 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGA1P17096 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGA1P17096 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGA1P17096 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
HMGA1P17096 RNA5SP235-201ENST00000365411 114 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGA1P17096 HMGN1P24-201ENST00000412282 298 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGA1P17096 AC091390.3-201ENST00000426478 338 ntBASIC3.54□□□□□ -1.84
HMGA1P17096 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGA1P17096 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms