Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 Y_RNA.500-201ENST00000384466 111 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL11A1P12107 MTND4P22-201ENST00000413116 1169 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 JKAMPP1-201ENST00000413804 919 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.93□□□□□ -1.78
COL11A1P12107 HSPE1P27-201ENST00000430808 296 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 AC236972.1-201ENST00000433225 199 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.93□□□□□ -1.78
COL11A1P12107 AC073657.2-201ENST00000605661 303 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 MIR4727-201ENST00000622232 55 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.93□□□□□ -1.78
COL11A1P12107 AL732372.2-225ENST00000642124 456 ntBASIC3.93□□□□□ -1.78
COL11A1P12107 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL11A1P12107 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL11A1P12107 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
COL11A1P12107 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.92□□□□□ -1.78
COL11A1P12107 RNA5SP374-201ENST00000362939 125 ntBASIC3.92□□□□□ -1.78
COL11A1P12107 RNA5SP229-201ENST00000410809 99 ntBASIC3.92□□□□□ -1.78
COL11A1P12107 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.92□□□□□ -1.78
COL11A1P12107 LIPT1P1-201ENST00000415870 1186 ntBASIC3.92□□□□□ -1.78
COL11A1P12107 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.92□□□□□ -1.78
COL11A1P12107 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL11A1P12107 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL11A1P12107 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC3.92□□□□□ -1.78
COL11A1P12107 AC112198.1-201ENST00000505369 1220 ntBASIC3.92□□□□□ -1.78
COL11A1P12107 HMGB3P13-201ENST00000511263 607 ntBASIC3.92□□□□□ -1.78
COL11A1P12107 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.92□□□□□ -1.78
COL11A1P12107 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.92□□□□□ -1.78
COL11A1P12107 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.92□□□□□ -1.78
COL11A1P12107 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.92□□□□□ -1.78
COL11A1P12107 AC083843.2-201ENST00000568248 6253 ntBASIC3.92□□□□□ -1.78
COL11A1P12107 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.92□□□□□ -1.78
COL11A1P12107 FAM35BP-202ENST00000497389 3337 ntBASIC3.92□□□□□ -1.78
COL11A1P12107 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL11A1P12107 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
COL11A1P12107 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
COL11A1P12107 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL11A1P12107 RPL23AP57-201ENST00000332361 466 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 U3.26-201ENST00000391236 204 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 Z99755.1-201ENST00000414048 380 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.91□□□□□ -1.78
COL11A1P12107 ANP32BP2-201ENST00000454525 545 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.91□□□□□ -1.78
COL11A1P12107 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.91□□□□□ -1.78
COL11A1P12107 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.91□□□□□ -1.78
COL11A1P12107 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.91□□□□□ -1.78
COL11A1P12107 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.91□□□□□ -1.78
COL11A1P12107 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.91□□□□□ -1.78
COL11A1P12107 MIMT1-201ENST00000597105 1050 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 AC020914.4-201ENST00000597690 277 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 AL033523.1-201ENST00000605153 153 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 AC103858.2-201ENST00000621471 543 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
COL11A1P12107 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL11A1P12107 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL11A1P12107 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL11A1P12107 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.91□□□□□ -1.78
COL11A1P12107 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COL11A1P12107 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.91□□□□□ -1.78
COL11A1P12107 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
COL11A1P12107 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL11A1P12107 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.91□□□□□ -1.78
COL11A1P12107 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL11A1P12107 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.91□□□□□ -1.78
COL11A1P12107 AC002075.2-201ENST00000425207 252 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.91□□□□□ -1.78
COL11A1P12107 AC097262.1-201ENST00000452559 548 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.91□□□□□ -1.78
COL11A1P12107 AC099560.2-201ENST00000457554 255 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 RPL32P34-201ENST00000486380 400 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.91□□□□□ -1.78
COL11A1P12107 HNRNPKP5-201ENST00000515300 253 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.91□□□□□ -1.78
COL11A1P12107 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.91□□□□□ -1.78
COL11A1P12107 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.91□□□□□ -1.78
COL11A1P12107 MIR3124-201ENST00000582636 67 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 AC084036.1-201ENST00000609190 508 ntBASIC3.91□□□□□ -1.78
COL11A1P12107 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL11A1P12107 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
COL11A1P12107 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL11A1P12107 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL11A1P12107 HSPA8P19-201ENST00000505359 1517 ntBASIC3.9□□□□□ -1.78
COL11A1P12107 AL022322.2-201ENST00000624072 20397 ntBASIC3.9□□□□□ -1.78
COL11A1P12107 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL11A1P12107 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL11A1P12107 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.9□□□□□ -1.79
COL11A1P12107 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.9□□□□□ -1.79
COL11A1P12107 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.9□□□□□ -1.79
COL11A1P12107 AL121766.1-201ENST00000547436 487 ntBASIC3.9□□□□□ -1.79
COL11A1P12107 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.9□□□□□ -1.79
COL11A1P12107 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.9□□□□□ -1.79
COL11A1P12107 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.9□□□□□ -1.79
COL11A1P12107 AC009464.1-201ENST00000615731 469 ntBASIC3.9□□□□□ -1.79
COL11A1P12107 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.9□□□□□ -1.79
COL11A1P12107 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
COL11A1P12107 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.89□□□□□ -1.79
COL11A1P12107 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL11A1P12107 SNORA48.5-201ENST00000391143 135 ntBASIC3.89□□□□□ -1.79
COL11A1P12107 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
COL11A1P12107 OR6C64P-201ENST00000419708 825 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms