Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
UBL4AP11441 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
UBL4AP11441 AL672167.1-205ENST00000641112 3080 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
UBL4AP11441 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.46□□□□□ -1.7
UBL4AP11441 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
UBL4AP11441 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 RN7SKP95-201ENST00000362860 303 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 RNU4-28P-201ENST00000364739 141 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 Y_RNA.465-201ENST00000384293 102 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 RNU6-1226P-201ENST00000384317 107 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 SPTLC1P2-201ENST00000407089 121 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AL590084.1-201ENST00000407885 387 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 RNA5SP345-201ENST00000410646 108 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 LUZP4P1-201ENST00000415420 344 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 HMGB3P5-201ENST00000428894 612 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.46□□□□□ -1.7
UBL4AP11441 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 AC004022.1-201ENST00000447766 1066 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 RPS3AP53-201ENST00000454716 778 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.46□□□□□ -1.7
UBL4AP11441 MTCO3P2-201ENST00000457365 171 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC013828.1-201ENST00000481845 158 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC104971.1-201ENST00000495117 578 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.46□□□□□ -1.7
UBL4AP11441 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.46□□□□□ -1.7
UBL4AP11441 AC016065.2-201ENST00000514530 444 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 RNU6-1261P-201ENST00000517194 104 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.46□□□□□ -1.7
UBL4AP11441 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.46□□□□□ -1.7
UBL4AP11441 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.46□□□□□ -1.7
UBL4AP11441 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 AL132657.2-201ENST00000564417 358 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC138915.2-201ENST00000569776 97 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 AC022022.2-201ENST00000602989 360 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC007566.2-201ENST00000603642 413 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC010424.2-201ENST00000607594 443 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC097505.1-201ENST00000610199 565 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC105429.2-201ENST00000610567 517 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 AC109809.1-201ENST00000619665 545 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AC073348.1-201ENST00000623002 331 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 AP000770.2-201ENST00000623694 100 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.46□□□□□ -1.7
UBL4AP11441 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.46□□□□□ -1.7
UBL4AP11441 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UBL4AP11441 AC108751.5-201ENST00000492880 1336 ntBASIC4.46□□□□□ -1.7
UBL4AP11441 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.45□□□□□ -1.7
UBL4AP11441 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBL4AP11441 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBL4AP11441 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBL4AP11441 AC095050.2-201ENST00000510748 1458 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBL4AP11441 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBL4AP11441 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
UBL4AP11441 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
UBL4AP11441 AL133384.1-201ENST00000412744 351 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 NRBF2P2-201ENST00000413087 861 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 RPL22P18-201ENST00000417197 377 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.45□□□□□ -1.7
UBL4AP11441 KRR1P1-201ENST00000419430 803 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
UBL4AP11441 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.45□□□□□ -1.7
UBL4AP11441 XKRYP1-201ENST00000423438 492 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.45□□□□□ -1.7
UBL4AP11441 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.45□□□□□ -1.7
UBL4AP11441 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBL4AP11441 XKRYP2-201ENST00000432915 492 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.45□□□□□ -1.7
UBL4AP11441 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.45□□□□□ -1.7
UBL4AP11441 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.45□□□□□ -1.7
UBL4AP11441 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.45□□□□□ -1.7
UBL4AP11441 RPL23AP76-201ENST00000441860 458 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 ELOCP13-201ENST00000443934 329 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 AC112498.1-201ENST00000444401 332 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.45□□□□□ -1.7
UBL4AP11441 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 NDUFS5P3-201ENST00000450668 321 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.45□□□□□ -1.7
UBL4AP11441 USP9YP25-201ENST00000457708 443 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.45□□□□□ -1.7
UBL4AP11441 AC090686.1-201ENST00000481577 749 ntBASIC4.45□□□□□ -1.7
UBL4AP11441 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.45□□□□□ -1.7
UBL4AP11441 OR5M14P-201ENST00000506803 618 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms