Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
COL2A1P02458 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL2A1P02458 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL2A1P02458 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL2A1P02458 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL2A1P02458 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL2A1P02458 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.4□□□□□ -1.7
COL2A1P02458 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL2A1P02458 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL2A1P02458 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL2A1P02458 VN1R51P-201ENST00000411675 945 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 OR5AW1P-201ENST00000426334 1006 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 USP12PY-201ENST00000427677 1064 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.4□□□□□ -1.71
COL2A1P02458 MTND4LP7-201ENST00000431728 294 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 AC096638.2-201ENST00000434965 711 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.4□□□□□ -1.71
COL2A1P02458 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL2A1P02458 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.4□□□□□ -1.71
COL2A1P02458 AC006511.1-201ENST00000470614 315 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 RN7SL601P-201ENST00000471221 293 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.4□□□□□ -1.71
COL2A1P02458 SNORA70.17-201ENST00000516449 133 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 Y_RNA.717-201ENST00000517106 92 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.4□□□□□ -1.71
COL2A1P02458 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.4□□□□□ -1.71
COL2A1P02458 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.4□□□□□ -1.71
COL2A1P02458 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.4□□□□□ -1.71
COL2A1P02458 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.4□□□□□ -1.71
COL2A1P02458 AC090772.4-201ENST00000623599 362 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.4□□□□□ -1.71
COL2A1P02458 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.4□□□□□ -1.71
COL2A1P02458 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.4□□□□□ -1.71
COL2A1P02458 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
COL2A1P02458 SCN1A-220ENST00000641603 12506 ntBASIC4.4□□□□□ -1.71
COL2A1P02458 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL2A1P02458 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL2A1P02458 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.39□□□□□ -1.71
COL2A1P02458 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL2A1P02458 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL2A1P02458 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.39□□□□□ -1.71
COL2A1P02458 MTND4P21-201ENST00000453886 1357 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.39□□□□□ -1.71
COL2A1P02458 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL2A1P02458 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL2A1P02458 SNORD9-201ENST00000362566 104 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AL353692.2-201ENST00000407054 335 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AL357078.2-201ENST00000416486 427 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.39□□□□□ -1.71
COL2A1P02458 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL2A1P02458 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.39□□□□□ -1.71
COL2A1P02458 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.39□□□□□ -1.71
COL2A1P02458 AL591363.1-201ENST00000450091 483 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.39□□□□□ -1.71
COL2A1P02458 BX510359.1-201ENST00000456973 237 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AC008155.2-201ENST00000464337 397 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.39□□□□□ -1.71
COL2A1P02458 DEFB109D-201ENST00000529497 240 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.39□□□□□ -1.71
COL2A1P02458 AC139103.1-201ENST00000534696 1030 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.39□□□□□ -1.71
COL2A1P02458 AC090888.2-201ENST00000559765 1144 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.39□□□□□ -1.71
COL2A1P02458 AC005776.1-201ENST00000603164 290 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AC079880.2-201ENST00000603790 1213 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AL713998.2-201ENST00000604538 1198 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 LSM1P2-201ENST00000604911 322 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.39□□□□□ -1.71
COL2A1P02458 AC018645.2-201ENST00000609151 472 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL2A1P02458 AC120349.3-201ENST00000624377 529 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 AC119674.1-207ENST00000641355 633 ntBASIC4.39□□□□□ -1.71
COL2A1P02458 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.39□□□□□ -1.71
COL2A1P02458 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL2A1P02458 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
COL2A1P02458 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
COL2A1P02458 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL2A1P02458 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.39□□□□□ -1.71
COL2A1P02458 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.39□□□□□ -1.71
COL2A1P02458 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.39□□□□□ -1.71
COL2A1P02458 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
COL2A1P02458 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL2A1P02458 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
COL2A1P02458 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 RNA5SP52-201ENST00000362448 134 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL2A1P02458 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.38□□□□□ -1.71
COL2A1P02458 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.38□□□□□ -1.71
COL2A1P02458 AC006994.1-201ENST00000438212 839 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.38□□□□□ -1.71
COL2A1P02458 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.38□□□□□ -1.71
COL2A1P02458 MTND2P22-201ENST00000444325 1033 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.38□□□□□ -1.71
COL2A1P02458 RAD1P2-201ENST00000446414 663 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 MTND6P5-201ENST00000448266 512 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL2A1P02458 RPL23AP12-201ENST00000467573 473 ntBASIC4.38□□□□□ -1.71
COL2A1P02458 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms