Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.84□□□□□ -1.79
HCN1O60741 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HCN1O60741 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.84□□□□□ -1.79
HCN1O60741 AC141257.3-201ENST00000572906 215 ntBASIC3.84□□□□□ -1.79
HCN1O60741 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.84□□□□□ -1.79
HCN1O60741 VN1R85P-201ENST00000601587 426 ntBASIC3.84□□□□□ -1.79
HCN1O60741 AC064801.1-201ENST00000612025 407 ntBASIC3.84□□□□□ -1.79
HCN1O60741 MIR1264-201ENST00000616374 69 ntBASIC3.84□□□□□ -1.79
HCN1O60741 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN1O60741 AL445363.3-201ENST00000623080 671 ntBASIC3.84□□□□□ -1.79
HCN1O60741 AP006248.3-201ENST00000623580 594 ntBASIC3.84□□□□□ -1.79
HCN1O60741 AC112484.5-201ENST00000624189 228 ntBASIC3.84□□□□□ -1.79
HCN1O60741 CR392039.4-201ENST00000624968 501 ntBASIC3.84□□□□□ -1.79
HCN1O60741 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.84□□□□□ -1.79
HCN1O60741 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HCN1O60741 MARK2P15-201ENST00000432204 2186 ntBASIC3.84□□□□□ -1.79
HCN1O60741 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN1O60741 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.8
HCN1O60741 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HCN1O60741 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCN1O60741 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCN1O60741 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCN1O60741 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HCN1O60741 RAD1P1-201ENST00000231383 813 ntBASIC3.83□□□□□ -1.8
HCN1O60741 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCN1O60741 RNA5SP515-201ENST00000364570 118 ntBASIC3.83□□□□□ -1.8
HCN1O60741 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCN1O60741 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.83□□□□□ -1.8
HCN1O60741 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCN1O60741 RNU4-31P-201ENST00000384211 141 ntBASIC3.83□□□□□ -1.8
HCN1O60741 RNU1-13P-201ENST00000384499 162 ntBASIC3.83□□□□□ -1.8
HCN1O60741 AL583835.1-201ENST00000399570 407 ntBASIC3.83□□□□□ -1.8
HCN1O60741 RN7SKP33-201ENST00000410942 340 ntBASIC3.83□□□□□ -1.8
HCN1O60741 USP9YP19-201ENST00000412165 485 ntBASIC3.83□□□□□ -1.8
HCN1O60741 RPL17P36-201ENST00000420302 549 ntBASIC3.83□□□□□ -1.8
HCN1O60741 RPS24P8-201ENST00000431490 402 ntBASIC3.83□□□□□ -1.8
HCN1O60741 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.83□□□□□ -1.8
HCN1O60741 AL590762.3-201ENST00000436372 640 ntBASIC3.83□□□□□ -1.8
HCN1O60741 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCN1O60741 AC006326.1-201ENST00000445465 787 ntBASIC3.83□□□□□ -1.8
HCN1O60741 YWHAQP9-201ENST00000445891 512 ntBASIC3.83□□□□□ -1.8
HCN1O60741 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN1O60741 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN1O60741 SNORD108-201ENST00000459332 71 ntBASIC3.83□□□□□ -1.8
HCN1O60741 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.83□□□□□ -1.8
HCN1O60741 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HCN1O60741 RPS29P19-201ENST00000479709 171 ntBASIC3.83□□□□□ -1.8
HCN1O60741 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.83□□□□□ -1.8
HCN1O60741 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN1O60741 RN7SKP82-201ENST00000516786 223 ntBASIC3.83□□□□□ -1.8
HCN1O60741 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN1O60741 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN1O60741 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN1O60741 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN1O60741 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN1O60741 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN1O60741 AC067959.1-201ENST00000604334 379 ntBASIC3.83□□□□□ -1.8
HCN1O60741 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.83□□□□□ -1.8
HCN1O60741 MIR486-1-201ENST00000612171 68 ntBASIC3.83□□□□□ -1.8
HCN1O60741 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCN1O60741 AC024941.1-201ENST00000612250 334 ntBASIC3.83□□□□□ -1.8
HCN1O60741 MIR7973-1-201ENST00000614683 76 ntBASIC3.83□□□□□ -1.8
HCN1O60741 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN1O60741 AC073592.7-201ENST00000623659 507 ntBASIC3.83□□□□□ -1.8
HCN1O60741 AC010608.2-201ENST00000624830 470 ntBASIC3.83□□□□□ -1.8
HCN1O60741 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN1O60741 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCN1O60741 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
HCN1O60741 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.82□□□□□ -1.8
HCN1O60741 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HCN1O60741 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.82□□□□□ -1.8
HCN1O60741 AL353743.4-201ENST00000422653 1547 ntBASIC3.82□□□□□ -1.8
HCN1O60741 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HCN1O60741 GTF2H2B-203ENST00000508065 1432 ntBASIC3.82□□□□□ -1.8
HCN1O60741 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HCN1O60741 RNU6-252P-201ENST00000363232 107 ntBASIC3.82□□□□□ -1.8
HCN1O60741 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HCN1O60741 ENSAP1-201ENST00000392855 326 ntBASIC3.82□□□□□ -1.8
HCN1O60741 AL138878.1-201ENST00000405131 347 ntBASIC3.82□□□□□ -1.8
HCN1O60741 AP000357.1-201ENST00000409926 1165 ntBASIC3.82□□□□□ -1.8
HCN1O60741 USP12PY-201ENST00000427677 1064 ntBASIC3.82□□□□□ -1.8
HCN1O60741 FO393419.3-201ENST00000428741 282 ntBASIC3.82□□□□□ -1.8
HCN1O60741 ELOCP6-201ENST00000429066 328 ntBASIC3.82□□□□□ -1.8
HCN1O60741 AL035458.1-201ENST00000433096 585 ntBASIC3.82□□□□□ -1.8
HCN1O60741 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.82□□□□□ -1.8
HCN1O60741 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.82□□□□□ -1.8
HCN1O60741 RPL23AP23-201ENST00000452590 471 ntBASIC3.82□□□□□ -1.8
HCN1O60741 ELOCP12-201ENST00000458706 328 ntBASIC3.82□□□□□ -1.8
HCN1O60741 RNA5SP246-201ENST00000458909 119 ntBASIC3.82□□□□□ -1.8
HCN1O60741 AC087385.1-201ENST00000475062 312 ntBASIC3.82□□□□□ -1.8
HCN1O60741 AC069499.1-201ENST00000489433 509 ntBASIC3.82□□□□□ -1.8
HCN1O60741 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HCN1O60741 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.82□□□□□ -1.8
HCN1O60741 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.82□□□□□ -1.8
HCN1O60741 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.82□□□□□ -1.8
HCN1O60741 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.82□□□□□ -1.8
HCN1O60741 AP003168.1-201ENST00000530091 307 ntBASIC3.82□□□□□ -1.8
HCN1O60741 AC105233.3-201ENST00000531125 744 ntBASIC3.82□□□□□ -1.8
HCN1O60741 AC092851.1-201ENST00000535964 478 ntBASIC3.82□□□□□ -1.8
HCN1O60741 OR8R1P-201ENST00000543943 764 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms