Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-416P-201ENST00000516265 103 ntBASIC4.1□□□□□ -1.75
PRKNO60260 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
PRKNO60260 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.1□□□□□ -1.75
PRKNO60260 AADACP1-206ENST00000561502 1193 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKNO60260 AC004223.2-201ENST00000590309 544 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.1□□□□□ -1.75
PRKNO60260 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKNO60260 AP003392.5-201ENST00000607857 415 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AL592148.2-201ENST00000612210 372 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKNO60260 AC093783.1-201ENST00000612976 329 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AC022106.2-201ENST00000620114 757 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AC078883.4-201ENST00000623218 367 ntBASIC4.1□□□□□ -1.75
PRKNO60260 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PRKNO60260 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.1□□□□□ -1.75
PRKNO60260 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
PRKNO60260 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRKNO60260 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRKNO60260 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKNO60260 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKNO60260 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
PRKNO60260 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.09□□□□□ -1.75
PRKNO60260 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 AC092079.1-201ENST00000558620 1985 ntBASIC4.09□□□□□ -1.75
PRKNO60260 MAPK10-303ENST00000641324 3959 ntBASIC4.09□□□□□ -1.75
PRKNO60260 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKNO60260 OR5P1P-201ENST00000299512 925 ntBASIC4.09□□□□□ -1.75
PRKNO60260 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PRKNO60260 snoZ40.1-201ENST00000364540 72 ntBASIC4.09□□□□□ -1.75
PRKNO60260 OR1L1-202ENST00000373686 1083 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC068538.1-201ENST00000376856 336 ntBASIC4.09□□□□□ -1.75
PRKNO60260 RNU6-317P-201ENST00000384031 107 ntBASIC4.09□□□□□ -1.75
PRKNO60260 SNORD116-2-201ENST00000384274 95 ntBASIC4.09□□□□□ -1.75
PRKNO60260 RNU6-83P-201ENST00000384568 112 ntBASIC4.09□□□□□ -1.75
PRKNO60260 SNORD116-6-201ENST00000384711 96 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC097374.1-203ENST00000400783 485 ntBASIC4.09□□□□□ -1.75
PRKNO60260 SFR1P1-201ENST00000403720 688 ntBASIC4.09□□□□□ -1.75
PRKNO60260 MIR1271-201ENST00000408537 86 ntBASIC4.09□□□□□ -1.75
PRKNO60260 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.09□□□□□ -1.75
PRKNO60260 AC048351.1-201ENST00000420064 602 ntBASIC4.09□□□□□ -1.75
PRKNO60260 GAPDHP49-201ENST00000421421 961 ntBASIC4.09□□□□□ -1.75
PRKNO60260 PHBP16-201ENST00000446318 950 ntBASIC4.09□□□□□ -1.75
PRKNO60260 Z83846.1-201ENST00000446798 265 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC007327.1-201ENST00000447461 264 ntBASIC4.09□□□□□ -1.75
PRKNO60260 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.09□□□□□ -1.75
PRKNO60260 MRPL42P4-201ENST00000453267 443 ntBASIC4.09□□□□□ -1.75
PRKNO60260 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKNO60260 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.09□□□□□ -1.75
PRKNO60260 RN7SL98P-201ENST00000462271 300 ntBASIC4.09□□□□□ -1.75
PRKNO60260 RPL35AP15-201ENST00000468042 339 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AL035404.1-201ENST00000497982 568 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.09□□□□□ -1.75
PRKNO60260 AC083829.1-201ENST00000503756 657 ntBASIC4.09□□□□□ -1.75
PRKNO60260 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.09□□□□□ -1.75
PRKNO60260 ATP1B1P1-201ENST00000509767 915 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC093840.1-201ENST00000511599 336 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC015795.1-201ENST00000513669 327 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.09□□□□□ -1.75
PRKNO60260 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKNO60260 TRAV8-5-201ENST00000537369 341 ntBASIC4.09□□□□□ -1.75
PRKNO60260 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 AC092747.2-201ENST00000545069 983 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKNO60260 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.09□□□□□ -1.75
PRKNO60260 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.09□□□□□ -1.75
PRKNO60260 KPNA2P3-201ENST00000584190 848 ntBASIC4.09□□□□□ -1.75
PRKNO60260 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
PRKNO60260 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.09□□□□□ -1.75
PRKNO60260 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.09□□□□□ -1.75
PRKNO60260 AL354984.3-201ENST00000604803 325 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC099676.1-201ENST00000608886 657 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AP000255.1-201ENST00000610276 676 ntBASIC4.09□□□□□ -1.75
PRKNO60260 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PRKNO60260 MLECP1-201ENST00000615893 709 ntBASIC4.09□□□□□ -1.75
PRKNO60260 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.09□□□□□ -1.75
PRKNO60260 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PRKNO60260 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PRKNO60260 AC087821.2-201ENST00000637086 450 ntBASIC4.09□□□□□ -1.75
PRKNO60260 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRKNO60260 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
PRKNO60260 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
PRKNO60260 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PRKNO60260 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PRKNO60260 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKNO60260 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKNO60260 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.08□□□□□ -1.76
PRKNO60260 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKNO60260 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PRKNO60260 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKNO60260 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms