Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC013244.3-201ENST00000605614 388 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AL445423.1-201ENST00000609941 536 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AC063944.3-201ENST00000609969 533 ntBASIC4.19□□□□□ -1.74
SSX4O60224 RNU6-156P-201ENST00000621869 107 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AL157770.1-201ENST00000623049 439 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AC124312.6-202ENST00000623624 418 ntBASIC4.19□□□□□ -1.74
SSX4O60224 AC006963.1-201ENST00000624003 1052 ntBASIC4.19□□□□□ -1.74
SSX4O60224 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX4O60224 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.19□□□□□ -1.74
SSX4O60224 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX4O60224 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.19□□□□□ -1.74
SSX4O60224 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SSX4O60224 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.19□□□□□ -1.74
SSX4O60224 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSX4O60224 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSX4O60224 MAPK10-303ENST00000641324 3959 ntBASIC4.19□□□□□ -1.74
SSX4O60224 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSX4O60224 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.19□□□□□ -1.74
SSX4O60224 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SSX4O60224 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX4O60224 IQCB2P-201ENST00000401788 1633 ntBASIC4.18□□□□□ -1.74
SSX4O60224 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SSX4O60224 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX4O60224 AP005901.5-201ENST00000545779 1796 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX4O60224 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SSX4O60224 RNU6-839P-201ENST00000363347 108 ntBASIC4.18□□□□□ -1.74
SSX4O60224 SNORA62-201ENST00000365493 153 ntBASIC4.18□□□□□ -1.74
SSX4O60224 RNU6-1242P-201ENST00000391052 103 ntBASIC4.18□□□□□ -1.74
SSX4O60224 ARL4AP5-201ENST00000404372 599 ntBASIC4.18□□□□□ -1.74
SSX4O60224 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 AL356320.2-201ENST00000417263 507 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 RPL30P3-201ENST00000424262 333 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AL138785.1-201ENST00000425821 331 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC016712.1-201ENST00000431088 378 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC010881.1-201ENST00000433830 235 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC091390.1-201ENST00000433904 331 ntBASIC4.18□□□□□ -1.74
SSX4O60224 PPIAP17-201ENST00000438507 471 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX4O60224 TPT1P12-201ENST00000448968 492 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC079776.3-201ENST00000450665 370 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 AL513533.1-201ENST00000453728 415 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 RPL21P71-201ENST00000465598 459 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC020898.1-201ENST00000474167 787 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX4O60224 AC113347.3-201ENST00000509113 148 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 RNU6-488P-201ENST00000515918 99 ntBASIC4.18□□□□□ -1.74
SSX4O60224 SNORD116-26-201ENST00000516006 96 ntBASIC4.18□□□□□ -1.74
SSX4O60224 RNU6-311P-201ENST00000516224 102 ntBASIC4.18□□□□□ -1.74
SSX4O60224 RNA5SP135-201ENST00000517019 125 ntBASIC4.18□□□□□ -1.74
SSX4O60224 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.18□□□□□ -1.74
SSX4O60224 AP001207.1-201ENST00000524051 481 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
SSX4O60224 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 AC069240.1-201ENST00000548774 375 ntBASIC4.18□□□□□ -1.74
SSX4O60224 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX4O60224 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.18□□□□□ -1.74
SSX4O60224 AC023813.2-201ENST00000564321 469 ntBASIC4.18□□□□□ -1.74
SSX4O60224 MIR3912-201ENST00000577566 105 ntBASIC4.18□□□□□ -1.74
SSX4O60224 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX4O60224 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SSX4O60224 AC105227.2-201ENST00000615075 605 ntBASIC4.18□□□□□ -1.74
SSX4O60224 MIR7703-201ENST00000620784 77 ntBASIC4.18□□□□□ -1.74
SSX4O60224 AL359757.1-201ENST00000623176 255 ntBASIC4.18□□□□□ -1.74
SSX4O60224 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX4O60224 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SSX4O60224 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.18□□□□□ -1.74
SSX4O60224 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX4O60224 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.17□□□□□ -1.74
SSX4O60224 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 RHOT1P2-201ENST00000366423 333 ntBASIC4.17□□□□□ -1.74
SSX4O60224 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX4O60224 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SSX4O60224 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms