Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MIR937-201ENST00000401271 86 ntBASIC4.23□□□□□ -1.73
RTCAO00442 HSPE1P26-201ENST00000405341 275 ntBASIC4.23□□□□□ -1.73
RTCAO00442 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.23□□□□□ -1.73
RTCAO00442 RAC1P3-201ENST00000416129 580 ntBASIC4.23□□□□□ -1.73
RTCAO00442 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTCAO00442 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.23□□□□□ -1.73
RTCAO00442 RPL23AP1-201ENST00000428990 471 ntBASIC4.23□□□□□ -1.73
RTCAO00442 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.23□□□□□ -1.73
RTCAO00442 UBE2V1P3-201ENST00000439651 417 ntBASIC4.23□□□□□ -1.73
RTCAO00442 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.23□□□□□ -1.73
RTCAO00442 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.23□□□□□ -1.73
RTCAO00442 NPM1P49-201ENST00000448027 714 ntBASIC4.23□□□□□ -1.73
RTCAO00442 AL162591.2-201ENST00000449634 317 ntBASIC4.23□□□□□ -1.73
RTCAO00442 DDX39BP2-208ENST00000453923 258 ntBASIC4.23□□□□□ -1.73
RTCAO00442 CEACAMP4-201ENST00000457676 421 ntBASIC4.23□□□□□ -1.73
RTCAO00442 AC087879.1-201ENST00000474343 374 ntBASIC4.23□□□□□ -1.73
RTCAO00442 AC108022.1-201ENST00000493466 478 ntBASIC4.23□□□□□ -1.73
RTCAO00442 AC068305.1-201ENST00000497406 726 ntBASIC4.23□□□□□ -1.73
RTCAO00442 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTCAO00442 IGLVIV-65-201ENST00000517313 360 ntBASIC4.23□□□□□ -1.73
RTCAO00442 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.23□□□□□ -1.73
RTCAO00442 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.23□□□□□ -1.73
RTCAO00442 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTCAO00442 GSTP1P1-201ENST00000548078 319 ntBASIC4.23□□□□□ -1.73
RTCAO00442 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.23□□□□□ -1.73
RTCAO00442 RPL12P25-202ENST00000598100 674 ntBASIC4.23□□□□□ -1.73
RTCAO00442 AL009028.1-201ENST00000604895 802 ntBASIC4.23□□□□□ -1.73
RTCAO00442 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTCAO00442 Z98200.1-201ENST00000607298 470 ntBASIC4.23□□□□□ -1.73
RTCAO00442 RMST_10.1-201ENST00000616309 154 ntBASIC4.23□□□□□ -1.73
RTCAO00442 MIR6891-201ENST00000618788 93 ntBASIC4.23□□□□□ -1.73
RTCAO00442 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.23□□□□□ -1.73
RTCAO00442 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTCAO00442 MFSD8-216ENST00000641147 4009 ntBASIC4.23□□□□□ -1.73
RTCAO00442 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTCAO00442 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
RTCAO00442 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RTCAO00442 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.22□□□□□ -1.73
RTCAO00442 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.22□□□□□ -1.73
RTCAO00442 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.22□□□□□ -1.73
RTCAO00442 AC016716.1-201ENST00000265882 708 ntBASIC4.22□□□□□ -1.73
RTCAO00442 RNA5SP28-201ENST00000363841 119 ntBASIC4.22□□□□□ -1.73
RTCAO00442 RNU6-481P-201ENST00000384194 107 ntBASIC4.22□□□□□ -1.73
RTCAO00442 RNU1-44P-201ENST00000384453 163 ntBASIC4.22□□□□□ -1.73
RTCAO00442 FABP12P1-201ENST00000401911 322 ntBASIC4.22□□□□□ -1.73
RTCAO00442 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
RTCAO00442 VDAC1P9-201ENST00000412766 841 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 RPS3AP9-201ENST00000417027 792 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC062016.2-201ENST00000420950 676 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC013410.2-201ENST00000422627 201 ntBASIC4.22□□□□□ -1.73
RTCAO00442 CENPIP1-201ENST00000425713 902 ntBASIC4.22□□□□□ -1.73
RTCAO00442 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.22□□□□□ -1.73
RTCAO00442 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.22□□□□□ -1.73
RTCAO00442 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.22□□□□□ -1.73
RTCAO00442 CYCSP43-201ENST00000438233 310 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.22□□□□□ -1.73
RTCAO00442 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.22□□□□□ -1.73
RTCAO00442 RPS17P11-201ENST00000474297 293 ntBASIC4.22□□□□□ -1.73
RTCAO00442 TPT1P3-201ENST00000492841 512 ntBASIC4.22□□□□□ -1.73
RTCAO00442 TRAV31-201ENST00000502780 342 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC119751.4-201ENST00000507498 357 ntBASIC4.22□□□□□ -1.73
RTCAO00442 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.22□□□□□ -1.73
RTCAO00442 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.22□□□□□ -1.73
RTCAO00442 RN7SKP92-201ENST00000517266 244 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC010476.1-201ENST00000519111 851 ntBASIC4.22□□□□□ -1.73
RTCAO00442 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
RTCAO00442 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.22□□□□□ -1.73
RTCAO00442 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.22□□□□□ -1.73
RTCAO00442 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.22□□□□□ -1.73
RTCAO00442 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.22□□□□□ -1.73
RTCAO00442 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.22□□□□□ -1.73
RTCAO00442 AP001160.4-201ENST00000596971 382 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC008687.2-201ENST00000597865 520 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC008536.1-201ENST00000602872 669 ntBASIC4.22□□□□□ -1.73
RTCAO00442 YWHAQP7-201ENST00000603536 658 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC115286.1-201ENST00000604298 434 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.22□□□□□ -1.73
RTCAO00442 uc_338.18-201ENST00000615451 175 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AP005019.3-201ENST00000620418 560 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC007546.2-201ENST00000623996 360 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC048347.1-201ENST00000624621 427 ntBASIC4.22□□□□□ -1.73
RTCAO00442 AC132825.7-201ENST00000638744 335 ntBASIC4.22□□□□□ -1.73
RTCAO00442 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.22□□□□□ -1.73
RTCAO00442 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 GABPAP-201ENST00000419271 1356 ntBASIC4.22□□□□□ -1.73
RTCAO00442 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RTCAO00442 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 SCN1A-220ENST00000641603 12506 ntBASIC4.22□□□□□ -1.73
RTCAO00442 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTCAO00442 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RTCAO00442 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
RTCAO00442 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTCAO00442 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms