Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.51□□□□□ -1.85
UPK1AO00322 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.51□□□□□ -1.85
UPK1AO00322 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.51□□□□□ -1.85
UPK1AO00322 PSMA6P4-201ENST00000603247 718 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 HMGB1P51-201ENST00000605166 638 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 AC007390.2-201ENST00000606229 3803 ntBASIC3.51□□□□□ -1.85
UPK1AO00322 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK1AO00322 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UPK1AO00322 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.51□□□□□ -1.85
UPK1AO00322 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.51□□□□□ -1.85
UPK1AO00322 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK1AO00322 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK1AO00322 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UPK1AO00322 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
UPK1AO00322 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1AO00322 AL049555.1-201ENST00000562834 1933 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1AO00322 AC058791.1-201ENST00000608412 3198 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
UPK1AO00322 RN7SKP227-201ENST00000364445 330 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1AO00322 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1AO00322 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
UPK1AO00322 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
UPK1AO00322 RNA5SP424-201ENST00000390988 115 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 SOD2P1-201ENST00000396543 562 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 SNORA57.3-201ENST00000411095 141 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1AO00322 SEC63P1-201ENST00000425785 1258 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 MTCO3P21-201ENST00000430791 643 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 AC074367.1-201ENST00000438685 1125 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.5□□□□□ -1.85
UPK1AO00322 AL645939.1-201ENST00000453429 797 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 RNU6-1218P-201ENST00000458990 108 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.5□□□□□ -1.85
UPK1AO00322 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.5□□□□□ -1.85
UPK1AO00322 FCF1P3-201ENST00000496394 590 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 ATG10-AS1-201ENST00000504846 648 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1AO00322 AC092593.2-201ENST00000513866 913 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 IGKV2D-23-201ENST00000518179 286 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.5□□□□□ -1.85
UPK1AO00322 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1AO00322 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1AO00322 SMARCE1P4-201ENST00000523647 241 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 OR4V1P-201ENST00000525394 1140 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.5□□□□□ -1.85
UPK1AO00322 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.5□□□□□ -1.85
UPK1AO00322 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1AO00322 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1AO00322 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.5□□□□□ -1.85
UPK1AO00322 AC006960.3-201ENST00000561845 705 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 HNRNPCP4-201ENST00000571636 900 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 AC087499.8-201ENST00000578406 226 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.5□□□□□ -1.85
UPK1AO00322 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1AO00322 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.5□□□□□ -1.85
UPK1AO00322 AC010857.1-201ENST00000606398 594 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.5□□□□□ -1.85
UPK1AO00322 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1AO00322 AC016717.3-201ENST00000624730 554 ntBASIC3.5□□□□□ -1.85
UPK1AO00322 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.5□□□□□ -1.85
UPK1AO00322 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
UPK1AO00322 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.5□□□□□ -1.85
UPK1AO00322 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
UPK1AO00322 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1AO00322 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1AO00322 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1AO00322 AC024560.2-201ENST00000507981 1497 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 RNA5SP515-201ENST00000364570 118 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 AL590704.1-201ENST00000402856 794 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 RN7SKP285-201ENST00000410137 318 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 RPL7P53-201ENST00000421245 739 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 AC073464.3-201ENST00000422564 712 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 AL591419.1-201ENST00000427423 339 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.49□□□□□ -1.85
UPK1AO00322 SETD6P1-201ENST00000444575 317 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 RPS20P21-201ENST00000466859 343 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 MTND6P6-201ENST00000478031 263 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1AO00322 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.49□□□□□ -1.85
UPK1AO00322 SNORA70.14-201ENST00000516205 110 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 AL139174.1-201ENST00000531489 886 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1AO00322 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1AO00322 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1AO00322 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 AGGF1P8-201ENST00000562979 1000 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1AO00322 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1AO00322 MIR3160-1-201ENST00000577972 85 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 AC022916.3-201ENST00000592961 742 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.49□□□□□ -1.85
UPK1AO00322 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 AC010200.2-201ENST00000605098 235 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms