Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SNORA11F-201ENST00000408237 128 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL19P1-201ENST00000411635 428 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL32P35-201ENST00000415214 394 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 IPPKP1-201ENST00000422501 768 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 CHIAP3-201ENST00000423668 1133 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC007559.1-201ENST00000428736 355 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC006011.1-201ENST00000442758 349 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 CEACAMP11-201ENST00000455211 583 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 DHFRP3-201ENST00000455595 559 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL7P32-201ENST00000457119 744 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC008571.1-201ENST00000467232 300 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC094085.1-201ENST00000468914 584 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AL136126.1-201ENST00000473603 402 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AP000563.1-201ENST00000490865 758 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC093278.1-201ENST00000494700 600 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL30P11-201ENST00000495304 339 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 NACAP5-201ENST00000509863 636 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 CDV3-208ENST00000511392 554 ntTSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 SNORD46.2-201ENST00000516021 102 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AP000926.4-201ENST00000527351 454 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC022832.1-201ENST00000530718 645 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 HAUS8P1-201ENST00000549005 542 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC087888.1-201ENST00000550884 1254 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 TVP23BP1-201ENST00000557500 617 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 MIR3667-201ENST00000581025 74 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 FKBP1AP1-201ENST00000594588 318 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AP003117.1-201ENST00000602771 554 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AL390816.3-201ENST00000604527 1066 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AL137849.1-201ENST00000604767 169 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC113403.1-201ENST00000604910 193 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 PACRG-211ENST00000621363 360 ntTSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AL732372.2-225ENST00000642124 456 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 DPY19L2P2-203ENST00000435536 1858 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 LARP1BP1-201ENST00000506036 1359 ntBASIC1.96□□□□□ -2.1
CHKB-CPT1BH3BT56 AC092447.7-201ENST00000422212 1621 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC008033.1-201ENST00000216407 1162 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 OR5P1P-201ENST00000299512 925 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 MIR331-201ENST00000362302 94 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 RNU1-14P-201ENST00000362759 152 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SKP95-201ENST00000362860 303 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SKP257-201ENST00000364525 309 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AL645927.1-201ENST00000396783 406 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 CHMP1B2P-201ENST00000399581 597 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 HMGB3P19-201ENST00000403971 560 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 ZNF602P-201ENST00000405929 924 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC013404.1-201ENST00000413068 249 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 RANP4-201ENST00000413361 655 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AL358472.1-201ENST00000431295 329 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 VDAC1P3-201ENST00000434069 851 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 OR52B5P-201ENST00000435337 951 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL23AP20-201ENST00000447965 421 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AURKAPS1-201ENST00000451805 1212 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SL860P-201ENST00000473738 223 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 F11-205ENST00000492972 1204 ntTSL 2 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC105233.1-201ENST00000498840 781 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC108078.3-201ENST00000502633 489 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 KRT19P6-201ENST00000510983 209 ntBASIC1.95□□□□□ -2.1
CHKB-CPT1BH3BT56 APOOP4-201ENST00000513530 597 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms