Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL161449.1-201ENST00000414531 1199 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 PTP4A1P5-201ENST00000420305 455 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AL606662.1-201ENST00000445763 553 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AL109741.2-201ENST00000455561 343 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 RPS3AP41-201ENST00000462701 778 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 RPL7P18-201ENST00000478965 734 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 GAPDHP36-201ENST00000480688 918 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 RN7SKP31-201ENST00000516354 278 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC087373.1-201ENST00000524920 491 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC090888.1-201ENST00000561335 1141 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 RN7SL176P-201ENST00000580352 264 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC010620.1-201ENST00000601088 1102 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 BPIFA4P-203ENST00000603168 689 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AL031281.1-201ENST00000604049 488 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AL390816.3-201ENST00000604527 1066 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC121247.2-201ENST00000604776 136 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AL592221.1-201ENST00000605266 382 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC073348.1-201ENST00000623002 331 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 ZNF137P-201ENST00000456718 1920 ntBASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TCRBV7S3A2A0A539 AC108467.2-201ENST00000617640 1597 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC027228.2-201ENST00000567141 2154 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 FAM3C2-201ENST00000312214 681 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC067945.1-201ENST00000342609 618 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 SNORD116-23-201ENST00000384645 92 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 MIR92A2-201ENST00000385299 75 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 Z98745.1-201ENST00000402553 494 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL139098.1-201ENST00000407291 389 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL450992.3-201ENST00000413192 568 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 USP9YP26-201ENST00000421008 661 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 PDSS1P1-201ENST00000422953 1114 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC104837.2-201ENST00000427236 424 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 NPM1P24-201ENST00000428039 894 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL445567.1-201ENST00000439121 144 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 RPL7P59-201ENST00000447700 943 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC091685.2-201ENST00000454924 864 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC012158.1-204ENST00000483430 465 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 UBA52P3-201ENST00000491303 382 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 RPS4XP14-201ENST00000493072 781 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC109471.1-201ENST00000511631 612 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AF279873.1-201ENST00000523393 313 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 UBE2FP2-201ENST00000566646 462 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC135628.1-201ENST00000568867 534 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 OR4K7P-201ENST00000580232 945 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 MIR4646-201ENST00000580775 63 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 MIR4999-201ENST00000585029 91 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC091488.1-201ENST00000604239 660 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC106791.2-201ENST00000604680 391 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AL158042.1-201ENST00000605338 460 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC079248.2-201ENST00000623779 326 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC068620.4-201ENST00000636730 1182 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 AC068137.4-201ENST00000638485 296 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms