Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ENSAP1-201ENST00000392855 326 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 VDAC1P9-201ENST00000412766 841 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC009302.1-201ENST00000417147 390 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 NANOGP5-201ENST00000424456 877 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC092634.2-201ENST00000428146 1010 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 PTGES3P1-201ENST00000439531 483 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 OR10R1P-201ENST00000441524 1141 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 CDC42P1-201ENST00000456658 548 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 RPL23AP12-201ENST00000467573 473 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 RN7SL604P-201ENST00000492589 296 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC023050.1-201ENST00000498198 304 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC008837.1-201ENST00000511513 412 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 HMGB1P23-201ENST00000518743 568 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC090151.1-201ENST00000520784 730 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC093591.2-201ENST00000565254 3843 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC022655.2-201ENST00000577280 318 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AL445435.1-201ENST00000604232 665 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC009974.1-201ENST00000608881 455 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 U6.48-201ENST00000618523 106 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC005086.4-201ENST00000623065 213 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AP001002.2-201ENST00000625137 386 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AC005332.5-201ENST00000591222 2919 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AL450326.2-201ENST00000421913 1962 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.43□□□□□ -1.7
YIPF1Q9Y548 AL592182.3-201ENST00000642132 3304 ntBASIC4.43□□□□□ -1.7
YIPF1Q9Y548 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 RPL32P23-201ENST00000397237 405 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AL359643.1-201ENST00000404109 423 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 RN7SKP247-201ENST00000411094 308 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 BTF3P8-201ENST00000414577 526 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 GTF2IP3-201ENST00000433887 494 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 HMGB1P45-201ENST00000435986 653 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 CBX1P4-201ENST00000439415 457 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AL592437.1-201ENST00000443781 492 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 DNAJC19P8-201ENST00000452887 259 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AC005229.2-201ENST00000456995 399 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 RPL23AP65-201ENST00000475608 468 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AC119751.1-201ENST00000513357 765 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 RNU6-347P-201ENST00000516658 105 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AC024060.1-201ENST00000607052 494 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 PART1_2.1-201ENST00000612397 250 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 AL353726.1-201ENST00000614041 1000 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 MIR6875-201ENST00000617506 72 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 BX649567.1-201ENST00000642071 1134 ntBASIC4.42□□□□□ -1.7
YIPF1Q9Y548 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
YIPF1Q9Y548 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms