Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 FGF7P3-201ENST00000454645 303 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AC090142.1-201ENST00000465776 462 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 RPL7AP6-201ENST00000477943 801 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 OR51K1P-201ENST00000510214 950 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 RN7SKP66-201ENST00000516681 231 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 RPA2P3-201ENST00000533268 770 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AC067852.5-201ENST00000589299 310 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 MIR8080-201ENST00000622224 89 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 MIR6810-201ENST00000622701 70 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 SNX18P3-202ENST00000565670 1750 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AC007996.1-201ENST00000620414 2821 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 OLMALINC-203ENST00000641087 3779 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 Y_RNA.184-201ENST00000363884 108 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 SNORA56-201ENST00000383966 129 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 Y_RNA.459-201ENST00000384251 102 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 RPL32P23-201ENST00000397237 405 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC009804.1-201ENST00000400949 179 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 RPS4XP8-201ENST00000402039 771 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 NCOR1P3-201ENST00000420479 303 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 MRPS17P3-201ENST00000465453 385 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC100832.1-201ENST00000471945 383 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC083795.1-201ENST00000491760 320 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 CEACAMP10-202ENST00000495431 496 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 RPSAP51-201ENST00000497462 645 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AP000676.2-201ENST00000529711 301 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC015720.2-201ENST00000567709 334 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC010525.2-201ENST00000590920 195 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC008737.2-201ENST00000599446 118 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC115621.1-201ENST00000604653 858 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC004853.1-201ENST00000604902 698 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC113139.1-201ENST00000605049 239 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 AC025125.1-201ENST00000624743 1922 ntBASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ZC3H4Q9UPT8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 RNU6-74P-201ENST00000384235 107 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 MIR559-201ENST00000385188 96 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 RNU6-510P-201ENST00000391239 108 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 RPL23AP32-201ENST00000395315 459 ntBASIC7.27□□□□□ -1.24
ZC3H4Q9UPT8 AL356967.1-201ENST00000406305 431 ntBASIC7.27□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms