Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 NANOGP6-201ENST00000429190 847 ntBASIC4.49□□□□□ -1.69
SCN11AQ9UI33 RN7SL807P-201ENST00000470923 297 ntBASIC4.49□□□□□ -1.69
SCN11AQ9UI33 RPL7P23-201ENST00000493874 747 ntBASIC4.49□□□□□ -1.69
SCN11AQ9UI33 HMGB1P19-201ENST00000517578 577 ntBASIC4.49□□□□□ -1.69
SCN11AQ9UI33 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 AL390334.1-201ENST00000556395 450 ntBASIC4.49□□□□□ -1.69
SCN11AQ9UI33 SNORD39.4-201ENST00000620099 78 ntBASIC4.49□□□□□ -1.69
SCN11AQ9UI33 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN11AQ9UI33 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 RNA5SP432-201ENST00000362480 116 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC017078.1-201ENST00000416146 368 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC022882.1-201ENST00000532142 501 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC073869.7-201ENST00000640874 297 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC118273.1-201ENST00000525324 3006 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AL136126.1-201ENST00000473603 402 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 MIR5680-201ENST00000577577 84 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC073657.2-201ENST00000605661 303 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC107294.1-201ENST00000609524 467 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AC135507.2-201ENST00000612443 309 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN11AQ9UI33 AL732372.2-225ENST00000642124 456 ntBASIC4.48□□□□□ -1.69
SCN11AQ9UI33 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AC004944.1-201ENST00000517807 3059 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 NACAP7-201ENST00000407371 609 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 LIPT1P1-201ENST00000415870 1186 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 RSL24D1P3-201ENST00000449255 495 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 RPL7P38-201ENST00000488396 739 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AC112198.1-201ENST00000505369 1220 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AC005798.1-201ENST00000513715 387 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 IGKV2-26-201ENST00000518305 343 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 MYL12AP1-201ENST00000518490 515 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AC015813.4-201ENST00000610469 179 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 MIR7851-201ENST00000610611 160 ntBASIC4.47□□□□□ -1.69
SCN11AQ9UI33 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SCN11AQ9UI33 AL133383.2-201ENST00000622958 2336 ntBASIC4.46□□□□□ -1.69
SCN11AQ9UI33 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.69
SCN11AQ9UI33 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 AC017007.4-201ENST00000503353 1352 ntBASIC4.46□□□□□ -1.7
SCN11AQ9UI33 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 SNORA48.5-201ENST00000391143 135 ntBASIC4.46□□□□□ -1.7
SCN11AQ9UI33 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 RNA5SP229-201ENST00000410809 99 ntBASIC4.46□□□□□ -1.7
SCN11AQ9UI33 OR6C64P-201ENST00000419708 825 ntBASIC4.46□□□□□ -1.7
SCN11AQ9UI33 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 UBE2NP1-201ENST00000545592 458 ntBASIC4.46□□□□□ -1.7
SCN11AQ9UI33 AC011270.1-201ENST00000558606 583 ntBASIC4.46□□□□□ -1.7
SCN11AQ9UI33 AC010653.1-201ENST00000571108 881 ntBASIC4.46□□□□□ -1.7
SCN11AQ9UI33 AC020914.4-201ENST00000597690 277 ntBASIC4.46□□□□□ -1.7
SCN11AQ9UI33 AL606834.2-201ENST00000602954 668 ntBASIC4.46□□□□□ -1.7
SCN11AQ9UI33 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.46□□□□□ -1.7
SCN11AQ9UI33 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AC063979.1-201ENST00000415539 377 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AL831737.1-201ENST00000441288 271 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 ANP32BP2-201ENST00000454525 545 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms