Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN1Q9P244 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
LRFN1Q9P244 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN1Q9P244 ZNF542P-204ENST00000482727 1305 ntBASIC4.71□□□□□ -1.66
LRFN1Q9P244 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AP001273.1-201ENST00000624493 3152 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 RN7SKP104-201ENST00000362605 328 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 RN7SKP113-201ENST00000363891 295 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 SNORA66-201ENST00000384792 133 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 RPL23AP29-201ENST00000397284 453 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 Z97832.1-201ENST00000402490 328 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AL024474.1-201ENST00000404655 591 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 RPL26P29-201ENST00000415623 438 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 RPL19P16-201ENST00000433839 588 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 PRPF38AP2-201ENST00000438179 851 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AL606662.1-201ENST00000445763 553 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 RN7SL443P-201ENST00000464331 290 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 RPS3AP22-201ENST00000488297 769 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 HNRNPKP5-201ENST00000515300 253 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 BRD9P1-201ENST00000529855 560 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 GSTP1P1-201ENST00000548078 319 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 MIR4999-201ENST00000585029 91 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC018638.7-201ENST00000605836 1114 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC010632.3-201ENST00000611377 369 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AL034549.2-201ENST00000618285 3373 ntBASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRFN1Q9P244 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN1Q9P244 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 CASC19-221ENST00000641309 1382 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 RNU1-130P-201ENST00000363930 160 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 ATP5F1P3-201ENST00000397213 657 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 ATP5F1P4-201ENST00000397288 746 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC016397.1-201ENST00000412463 242 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 TPT1P2-201ENST00000413105 503 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC104837.2-201ENST00000427236 424 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 OR51AB1P-201ENST00000429046 620 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL354941.1-201ENST00000438600 464 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 MTCYBP3-201ENST00000445588 1137 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms