Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 Y_RNA.159-201ENST00000363674 87 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 RNU6-282P-201ENST00000365357 103 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC092642.1-201ENST00000392417 425 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AL356432.1-201ENST00000405809 419 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC127391.1-201ENST00000411737 98 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 PDCL2P1-201ENST00000419302 352 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC093155.2-201ENST00000420734 937 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC007394.1-201ENST00000421941 531 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AL365400.1-201ENST00000431854 640 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 RSU1P2-202ENST00000437884 485 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 NIPA2P5-201ENST00000452282 464 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AL445687.2-201ENST00000458156 728 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 RN7SKP288-201ENST00000516227 268 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 RNU6-201P-201ENST00000517100 61 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 OR5M2P-201ENST00000529003 936 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC011611.1-201ENST00000552179 197 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC078814.3-201ENST00000553036 491 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC055876.1-202ENST00000567053 138 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AP001429.1-201ENST00000602568 530 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 AL133173.2-201ENST00000614270 90 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 AC138649.5-201ENST00000637456 137 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CNTN3Q9P232 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 CCT4P2-201ENST00000233836 1548 ntBASIC6.34□□□□□ -1.39
CNTN3Q9P232 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTN3Q9P232 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.34□□□□□ -1.4
CNTN3Q9P232 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CNTN3Q9P232 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CNTN3Q9P232 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
CNTN3Q9P232 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AL022323.4-201ENST00000623980 13120 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 PWAR1-201ENST00000624188 2414 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 RPL23AP32-201ENST00000395315 459 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 OR9R1P-201ENST00000412200 877 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 MRPL50P2-201ENST00000416821 482 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 RPS26P40-201ENST00000435209 294 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AL161636.2-201ENST00000445179 927 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AL354710.1-201ENST00000453641 246 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 RPL37P3-201ENST00000456825 293 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC063943.1-201ENST00000465434 453 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC010301.1-201ENST00000473936 355 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC093278.1-201ENST00000494700 600 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC104109.1-201ENST00000498563 436 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms