Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNU6-513P-201ENST00000516104 104 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 RNU6-941P-201ENST00000516346 108 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC021678.3-201ENST00000517893 476 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 OR10G5P-201ENST00000532733 358 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC007599.1-201ENST00000568688 1174 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC087683.1-201ENST00000591187 441 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AL136363.2-201ENST00000604173 851 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC005084.1-201ENST00000605160 304 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC092354.2-201ENST00000607786 514 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC015540.1-201ENST00000615828 501 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AP000648.2-201ENST00000624182 404 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 AC006210.2-201ENST00000367074 1545 ntBASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCM2LQ9NUG4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AL731532.2-201ENST00000623542 1953 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 RNA5SP46-201ENST00000362370 120 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 RNU5F-6P-201ENST00000362979 116 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 RNA5SP30-201ENST00000365552 115 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 RNU6-171P-201ENST00000384354 107 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 MIR585-201ENST00000384887 94 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC025750.1-201ENST00000399891 379 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 Y_RNA.619-201ENST00000410951 90 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 RPL12P34-201ENST00000424532 479 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 RPS3AP44-201ENST00000425466 790 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 CFL1P1-202ENST00000432948 411 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 SPRYD7P1-201ENST00000443861 570 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 USP9YP29-201ENST00000445112 563 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 RN7SL826P-201ENST00000479724 288 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 RPL32P33-201ENST00000487023 394 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC231760.1-201ENST00000498002 260 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 IGLV3-30-201ENST00000524362 298 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 OR4A45P-201ENST00000529954 901 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC141257.3-201ENST00000572906 215 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC006272.2-201ENST00000594725 163 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC012065.4-201ENST00000602445 679 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC112187.2-201ENST00000604345 283 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 AC011978.2-201ENST00000569835 2054 ntBASIC5.16□□□□□ -1.58
CCM2LQ9NUG4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
CCM2LQ9NUG4 AL590763.1-201ENST00000398297 1545 ntBASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms