Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HPS4Q9NQG7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 RNU1-44P-201ENST00000384453 163 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 MIR142-201ENST00000384835 87 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AL603766.1-201ENST00000407763 664 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 TPT1P2-201ENST00000413105 503 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC115285.1-201ENST00000424879 736 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 RPS24P8-201ENST00000431490 402 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AL353748.1-201ENST00000440753 474 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC079804.1-201ENST00000461922 436 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC091959.2-201ENST00000477363 321 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC104164.2-201ENST00000496953 495 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC146944.2-203ENST00000502493 354 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 NPM1P41-201ENST00000512920 831 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC139495.1-202ENST00000513164 354 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC022655.2-201ENST00000577280 318 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 MIR4458-201ENST00000578872 75 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 OR1AB1P-201ENST00000585564 761 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AC112200.1-201ENST00000625015 234 ntBASIC4.31□□□□□ -1.72
HPS4Q9NQG7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HPS4Q9NQG7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC067945.1-201ENST00000342609 618 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 HMGB1P13-201ENST00000406019 642 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 RN7SKP159-201ENST00000410657 292 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 LINC01347-201ENST00000417964 355 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 UBTFL3-201ENST00000418934 1024 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC073508.1-201ENST00000428866 656 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 PTP4A1P3-201ENST00000433661 420 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AL031663.1-201ENST00000437445 219 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC034236.1-201ENST00000469891 373 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 UBTFL6-201ENST00000477929 1024 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 NPM1P17-201ENST00000479221 602 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 RPS29P19-201ENST00000479709 171 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC023050.1-201ENST00000498198 304 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC025768.1-201ENST00000510057 267 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 IFITM8P-201ENST00000522529 394 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 CIR1P1-201ENST00000524055 1133 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AP002812.4-201ENST00000532139 286 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AL671309.1-201ENST00000603750 544 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC010680.4-201ENST00000605334 543 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC116563.2-201ENST00000624751 535 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC105074.1-201ENST00000623380 3095 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC024341.1-201ENST00000526444 1552 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC138393.1-206ENST00000540997 1886 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms