Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC108210.2-201ENST00000503681 201 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC113430.1-201ENST00000506872 718 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC098826.3-201ENST00000603823 466 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 IMMP1LP1-201ENST00000605170 488 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC105272.1-201ENST00000438604 198 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC108734.1-201ENST00000439549 399 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC008264.1-201ENST00000447612 367 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 RPS17P13-201ENST00000448974 407 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC006445.1-201ENST00000491925 405 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC063950.1-201ENST00000552036 308 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AL672167.1-204ENST00000641875 3017 ntBASIC3.38□□□□□ -1.87
CHD8Q9HCK8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.38□□□□□ -1.87
CHD8Q9HCK8 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 RNU1-140P-201ENST00000365040 165 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AL031679.1-201ENST00000400616 525 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 NUP35P1-201ENST00000422734 947 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 OR6K4P-201ENST00000423179 955 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AC090013.1-201ENST00000485147 480 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 RN7SKP132-201ENST00000516001 208 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 MIR4319-201ENST00000577285 85 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 ELOCP29-201ENST00000588193 334 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AC068254.2-201ENST00000623938 3577 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 SNORA44-201ENST00000384584 132 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 HLFP1-201ENST00000402375 499 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 snoU13.18-201ENST00000459483 104 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 RPL7P24-201ENST00000493052 752 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AC091826.1-201ENST00000514065 313 ntBASIC3.37□□□□□ -1.87
CHD8Q9HCK8 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHD8Q9HCK8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AL136116.1-201ENST00000403591 381 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AC073069.1-201ENST00000428657 441 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 WASF1P1-201ENST00000447560 1131 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AC008413.1-201ENST00000511864 177 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AC009097.3-201ENST00000563557 1018 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AL365400.2-201ENST00000605604 902 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AL591806.2-201ENST00000433122 173 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AC146507.2-201ENST00000460608 476 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AC008565.1-201ENST00000509046 885 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 RNA5SP208-201ENST00000516156 78 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 MIR7851-201ENST00000610611 160 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 Xist_exon4.1-201ENST00000615964 126 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 AP000553.6-201ENST00000641242 118 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 HSPD1P14-201ENST00000432666 1618 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 ZNF962P-201ENST00000443465 3140 ntBASIC3.36□□□□□ -1.87
CHD8Q9HCK8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.36□□□□□ -1.87
CHD8Q9HCK8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC245054.1-201ENST00000420944 258 ntBASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.35□□□□□ -1.87
CHD8Q9HCK8 AC091179.1-201ENST00000461606 579 ntBASIC3.35□□□□□ -1.87
CHD8Q9HCK8 OR9N1P-201ENST00000491296 333 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms