Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AL078599.1-201ENST00000402075 293 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AL645733.1-201ENST00000402250 217 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 Z97832.1-201ENST00000402490 328 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 EEF1A1P40-201ENST00000412883 573 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 OFD1P18Y-201ENST00000420889 959 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC009238.2-201ENST00000431026 355 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 RPS27P18-201ENST00000431701 247 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 ATP5HP2-201ENST00000433885 485 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC008072.1-201ENST00000434254 824 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 KCTD9P3-201ENST00000434597 1169 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 MTND1P28-201ENST00000435623 950 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 COX6CP12-201ENST00000446748 202 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 PAXBP1P1-201ENST00000449315 447 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 BX842559.2-201ENST00000451418 605 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 RPL32P9-201ENST00000487963 407 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 RPL9P6-201ENST00000492764 598 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC090071.1-201ENST00000507713 644 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC004980.4-201ENST00000513375 203 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 SNORA20.3-201ENST00000516880 132 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 RNA5SP230-201ENST00000517039 122 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC123904.3-201ENST00000547218 814 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 GTF2IP22-201ENST00000554443 182 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 MIR4528-201ENST00000577763 90 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 RN7SL290P-201ENST00000578661 300 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 MIR4646-201ENST00000580775 63 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 BNIP3P9-201ENST00000603714 553 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 SUMO2P14-201ENST00000604488 293 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 EIF3FP1-201ENST00000613970 806 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 CR381653.2-201ENST00000624041 768 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 CASC19-221ENST00000641309 1382 ntBASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP1Q96SZ6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 RNU6-560P-201ENST00000364007 108 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 Y_RNA.535-201ENST00000384612 99 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC093719.1-202ENST00000392735 373 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AL035419.1-201ENST00000397037 564 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 RN7SKP114-201ENST00000410327 279 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 CBX1P2-201ENST00000453841 458 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC146507.1-201ENST00000468335 354 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC023424.1-201ENST00000496058 459 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 RPSAP51-201ENST00000497462 645 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC108941.1-201ENST00000502853 530 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC093824.1-201ENST00000508796 343 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 RN7SKP147-201ENST00000517154 244 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AC124947.2-202ENST00000552735 133 ntBASIC5.37□□□□□ -1.55
CDK5RAP1Q96SZ6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms