Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC092079.1-201ENST00000558620 1985 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC011155.1-201ENST00000316512 456 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 RNU6-543P-201ENST00000362576 108 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 RNU6-236P-201ENST00000363886 106 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 Y_RNA.578-201ENST00000390903 88 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 RPS26P8-201ENST00000393490 348 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 RPS7P9-201ENST00000414704 586 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 TAF13P2-201ENST00000416876 286 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 RPS12P10-201ENST00000427031 377 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AL357520.1-201ENST00000441557 453 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AL050341.1-201ENST00000447743 313 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC108463.1-201ENST00000450258 347 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 EIF4A1P11-201ENST00000451239 222 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 SCARNA10-201ENST00000459255 330 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 RNU7-140P-201ENST00000459546 60 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 RPL21P126-201ENST00000470049 478 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 RNA5SP446-201ENST00000515955 82 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 RN7SKP21-201ENST00000516503 220 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 LRRC6P1-201ENST00000532188 885 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC097478.2-201ENST00000610572 514 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC010975.3-201ENST00000618727 978 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC013470.4-201ENST00000619978 986 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AP003485.2-201ENST00000623636 610 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 AC006065.6-201ENST00000625201 545 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 AL121594.5-201ENST00000631724 573 ntBASIC4.22□□□□□ -1.73
TM9SF4Q92544 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TM9SF4Q92544 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.22□□□□□ -1.73
TM9SF4Q92544 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TM9SF4Q92544 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.73
TM9SF4Q92544 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TM9SF4Q92544 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TM9SF4Q92544 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TM9SF4Q92544 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TM9SF4Q92544 FAM3C2-201ENST00000312214 681 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TM9SF4Q92544 RNU1-108P-201ENST00000362556 161 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 RNU6-353P-201ENST00000364266 108 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 RNU4-68P-201ENST00000364314 141 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 RNU6-185P-201ENST00000384421 107 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 SNORA57.1-201ENST00000391227 145 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TM9SF4Q92544 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 EIF4EP1-201ENST00000422311 642 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 RPL7AP25-201ENST00000423357 805 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 RPS27AP12-201ENST00000429552 465 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 YWHAEP5-201ENST00000431545 765 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 NANOGP2-201ENST00000435391 727 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 RPL34P26-201ENST00000445636 354 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 AL035407.2-201ENST00000454090 378 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 RPL23AP65-201ENST00000475608 468 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 PGBD4P4-201ENST00000509673 613 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 AC005351.1-201ENST00000511152 786 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 MTCO1P35-201ENST00000515270 228 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 OR4A2P-201ENST00000527276 913 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 MRPS36P5-201ENST00000551909 298 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 AC023813.2-201ENST00000564321 469 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 MIR3160-1-201ENST00000577972 85 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.21□□□□□ -1.74
TM9SF4Q92544 PCNAP1-202ENST00000595299 752 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 VN1R78P-201ENST00000597393 564 ntBASIC4.21□□□□□ -1.74
TM9SF4Q92544 RPL7P50-201ENST00000600588 727 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms