Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 RN7SL176P-201ENST00000580352 264 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC006130.2-201ENST00000586202 326 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AL591034.3-201ENST00000605511 685 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 AC022106.2-201ENST00000620114 757 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 MIR3653-201ENST00000625572 110 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 MFSD8-245ENST00000641743 948 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 MAPK10-349ENST00000641767 3661 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 XPOTP1-201ENST00000443317 2398 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.99□□□□□ -1.61
HERC6Q8IVU3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HERC6Q8IVU3 DBF4P1-201ENST00000412976 1892 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 RNU4-44P-201ENST00000363050 141 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 RNA5SP366-201ENST00000365454 123 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 RNU6-1151P-201ENST00000384684 107 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 PRELID3BP11-201ENST00000414230 479 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AL592310.1-201ENST00000414330 671 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 OR4K6P-201ENST00000416478 897 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 PAICSP7-201ENST00000419829 962 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 MTCO1P3-201ENST00000429327 192 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC023347.2-201ENST00000433994 462 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 RPS3AP54-201ENST00000435535 734 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 SCARNA10-201ENST00000459255 330 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 RPS7P7-201ENST00000463499 571 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AL591473.1-201ENST00000464297 313 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC090142.1-201ENST00000465776 462 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC134050.1-201ENST00000495088 933 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 RPL30P11-201ENST00000495304 339 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 OR8R1P-201ENST00000543943 764 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC004217.3-201ENST00000551552 878 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AGGF1P5-201ENST00000567900 919 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 MIR4512-201ENST00000583257 77 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC017100.2-201ENST00000584628 355 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC022916.3-201ENST00000592961 742 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 BNIP3P38-201ENST00000601117 544 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AL392112.1-201ENST00000605115 829 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AL450336.1-201ENST00000605180 586 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AP005137.2-201ENST00000609238 400 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 MIR492-201ENST00000638676 116 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 OR8B1P-202ENST00000641132 1178 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.98□□□□□ -1.61
HERC6Q8IVU3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HERC6Q8IVU3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.97□□□□□ -1.61
HERC6Q8IVU3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 AL031119.1-201ENST00000404707 1879 ntBASIC4.97□□□□□ -1.61
HERC6Q8IVU3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 RNA5SP171-201ENST00000391071 115 ntBASIC4.97□□□□□ -1.61
HERC6Q8IVU3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 SDHCP2-201ENST00000398565 501 ntBASIC4.97□□□□□ -1.61
HERC6Q8IVU3 AL022722.2-201ENST00000402519 180 ntBASIC4.97□□□□□ -1.61
HERC6Q8IVU3 RPL36AP10-201ENST00000421785 322 ntBASIC4.97□□□□□ -1.61
HERC6Q8IVU3 AL513175.2-201ENST00000422071 443 ntBASIC4.97□□□□□ -1.61
HERC6Q8IVU3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.97□□□□□ -1.61
HERC6Q8IVU3 RAC1P8-201ENST00000427086 527 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms