Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 HMGB1P23-201ENST00000518743 568 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 HMGB1P41-201ENST00000520234 440 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 OR5D2P-201ENST00000524390 911 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 COPS8P3-201ENST00000526024 482 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 SNRPGP18-201ENST00000553000 214 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC007938.3-201ENST00000604965 623 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 BCRP9-201ENST00000605312 388 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AP000654.2-201ENST00000605633 586 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC008966.2-201ENST00000606157 453 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC015982.1-201ENST00000608113 465 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 AC093297.3-201ENST00000607056 2517 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 RIOK3P1-201ENST00000418778 1528 ntBASIC5.47□□□□□ -1.53
ATG4DQ86TL0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ATG4DQ86TL0 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.46□□□□□ -1.53
ATG4DQ86TL0 AC140479.2-201ENST00000421567 3130 ntBASIC5.46□□□□□ -1.53
ATG4DQ86TL0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.46□□□□□ -1.53
ATG4DQ86TL0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ATG4DQ86TL0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
ATG4DQ86TL0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RBMY1HP-201ENST00000382759 1389 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RNU1-134P-201ENST00000362935 165 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RN7SKP15-201ENST00000364742 309 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 MIR130B-202ENST00000385018 82 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RNY4P36-201ENST00000391116 96 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RNU4-14P-201ENST00000410858 122 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC245096.1-201ENST00000413104 546 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 NME1P1-201ENST00000420914 382 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 NMD3P2-201ENST00000421815 761 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC245884.2-201ENST00000426257 404 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RPL21P110-201ENST00000433345 446 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC002504.1-201ENST00000438281 691 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 EIF5AP4-201ENST00000441206 465 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RPL7P59-201ENST00000447700 943 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RPS24P6-201ENST00000452670 400 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 PPIAP7-201ENST00000454070 489 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 BTF3P15-201ENST00000455606 336 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 ACA64.4-201ENST00000459070 127 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 TRBV5-2-201ENST00000489095 273 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC083795.1-201ENST00000491760 320 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC106872.3-201ENST00000495104 446 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 EIF4EP3-201ENST00000498782 656 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC138866.2-201ENST00000508650 584 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 SNORD60.2-201ENST00000516883 86 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RNU6-988P-201ENST00000519081 107 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AP005902.1-201ENST00000521358 186 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AP000620.1-201ENST00000527147 504 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 OR8A2P-201ENST00000528631 952 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 CYCSP38-201ENST00000559840 322 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 MIR4310-201ENST00000582950 57 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC078899.5-201ENST00000612475 178 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 uc_338.26-201ENST00000612659 160 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC244517.12-201ENST00000623581 663 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AL359757.2-201ENST00000624309 274 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms