Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC078918.1-201ENST00000498515 228 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 UBE2CP3-201ENST00000502715 450 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC108145.1-201ENST00000503770 153 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCXQ7RTU7 HMGB1P23-201ENST00000518743 568 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 OR5BC1P-201ENST00000529327 739 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 UBTFL9-201ENST00000534504 1148 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC106785.1-201ENST00000565935 262 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC020914.4-201ENST00000597690 277 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AL133247.2-201ENST00000603236 482 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC103710.3-201ENST00000608157 948 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC112503.1-201ENST00000608436 391 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 U6.48-201ENST00000618523 106 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 MIR8059-201ENST00000620427 81 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC091905.2-201ENST00000623143 306 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AF127577.6-201ENST00000623352 2191 ntBASIC2.75□□□□□ -1.97
SCXQ7RTU7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCXQ7RTU7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCXQ7RTU7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC2.75□□□□□ -1.97
SCXQ7RTU7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 MTCO1P8-201ENST00000416914 1523 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 RNA5SP175-201ENST00000364275 119 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 RNA5SP151-201ENST00000365632 117 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 AL590290.1-201ENST00000405336 380 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 AMD1P2-201ENST00000412936 992 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 RANP4-201ENST00000413361 655 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 MTND2P11-201ENST00000423638 648 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 COX6CP15-201ENST00000426313 211 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 HMGB3P5-201ENST00000428894 612 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 BTF3P10-201ENST00000433415 495 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 CDC27P1-201ENST00000445384 715 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 DDX39BP2-208ENST00000453923 258 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 RPL35AP15-201ENST00000468042 339 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 RPS26P15-201ENST00000488067 348 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 RPS27AP13-201ENST00000498403 237 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 USP9YP5-201ENST00000511770 630 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 RNA5SP49-201ENST00000516450 115 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 RNA5SP519-201ENST00000516480 119 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 RNU6-889P-201ENST00000517189 103 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 RNU4-60P-201ENST00000517239 135 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 AP004242.1-201ENST00000533701 349 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 OR8R1P-201ENST00000543943 764 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC091515.1-201ENST00000548110 679 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC245128.3-201ENST00000594721 748 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 AL354984.3-201ENST00000604803 325 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 LINC00216-201ENST00000623548 1126 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 GTF2H2B-203ENST00000508065 1432 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SCXQ7RTU7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 ERCC6-202ENST00000374127 1782 ntBASIC2.74□□□□□ -1.97
SCXQ7RTU7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCXQ7RTU7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SCXQ7RTU7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC2.73□□□□□ -1.97
SCXQ7RTU7 AC027287.1-201ENST00000553115 1453 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms