Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3F3CQ6NXT2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
H3F3CQ6NXT2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.74□□□□□ -1.81
H3F3CQ6NXT2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 HMGB3P19-201ENST00000403971 560 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 RN7SKP159-201ENST00000410657 292 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 RN7SKP27-201ENST00000410684 333 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 HMGB3P5-201ENST00000428894 612 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 XKRYP6-201ENST00000440468 1116 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 RRM2P4-201ENST00000441721 562 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 XKRYP3-201ENST00000442113 1116 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC007537.2-201ENST00000472093 511 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC107398.1-201ENST00000486904 505 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 RN7SL271P-201ENST00000487601 295 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC092045.1-201ENST00000495716 1231 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 IGHV3-32-201ENST00000519182 355 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AL360157.1-201ENST00000565962 87 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 RPL23AP87-202ENST00000573039 466 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 ZNF92P3-201ENST00000596594 954 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC022387.2-201ENST00000604050 448 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 MIR432-201ENST00000606207 94 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AC090246.1-201ENST00000616499 426 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AP004607.9-201ENST00000618202 316 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AL161637.1-201ENST00000622380 412 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 MIR6500-201ENST00000622700 86 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 ZNF962P-201ENST00000443465 3140 ntBASIC3.73□□□□□ -1.81
H3F3CQ6NXT2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 RN7SKP202-201ENST00000410439 330 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 RNU4-6P-201ENST00000410804 122 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 RNA5SP306-201ENST00000411087 107 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 TCEA1P4-201ENST00000415066 844 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 RPL31P45-201ENST00000419532 356 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 CYP4F29P-201ENST00000420685 446 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 RPL7P53-201ENST00000421245 739 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 TBCAP1-201ENST00000436520 327 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 HMGB1P3-201ENST00000502802 616 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 AC110792.2-201ENST00000510278 224 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 MTCO1P49-201ENST00000523429 802 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 AC073111.2-201ENST00000605657 1075 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 AC090912.3-201ENST00000609775 533 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 uc_338.32-201ENST00000615087 172 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 FAM35DP-201ENST00000323387 2712 ntBASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3CQ6NXT2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3CQ6NXT2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
H3F3CQ6NXT2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3CQ6NXT2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3CQ6NXT2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms