Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 RNA5SP197-201ENST00000363357 119 ntBASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 RN7SKP199-201ENST00000410325 305 ntBASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 HIGD1AP12-201ENST00000427832 281 ntBASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 AC069285.2-201ENST00000440210 275 ntBASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 AL163642.2-201ENST00000604722 1019 ntBASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 AC093732.2-201ENST00000607950 274 ntBASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 ATP5A1P2-202ENST00000616464 443 ntBASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 AC068722.2-201ENST00000618734 544 ntBASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 OR5AC4P-202ENST00000642086 985 ntBASIC5.74□□□□□ -1.49
SNAPC4Q5SXM2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 RPL12P18-201ENST00000437175 325 ntBASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 TCP11X3P-202ENST00000514289 1254 ntBASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 BMS1P21-201ENST00000634565 365 ntBASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 MFSD8-233ENST00000641482 4860 ntBASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.73□□□□□ -1.49
SNAPC4Q5SXM2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 RNU6-316P-201ENST00000391027 107 ntBASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 AC004024.1-201ENST00000549244 247 ntBASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 AL353600.1-201ENST00000608148 251 ntBASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.72□□□□□ -1.49
SNAPC4Q5SXM2 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 SNORA48.8-201ENST00000391324 134 ntBASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 HMGB3P13-201ENST00000511263 607 ntBASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 AC027309.2-201ENST00000520566 192 ntBASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SNAPC4Q5SXM2 Z83843.1-201ENST00000604070 3685 ntBASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 HSPA8P17-201ENST00000427029 1382 ntBASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 SEPT14P1-201ENST00000458703 648 ntBASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 AC022795.1-201ENST00000473808 480 ntBASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 AC109925.1-201ENST00000478069 331 ntBASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 RPS3AP43-201ENST00000479743 781 ntBASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 RPL7P38-201ENST00000488396 739 ntBASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.71□□□□□ -1.5
SNAPC4Q5SXM2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 KATNBL1P2-201ENST00000433311 835 ntBASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AC099563.1-201ENST00000456086 418 ntBASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AC110794.1-201ENST00000505816 425 ntBASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AC109458.1-201ENST00000508858 316 ntBASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms