Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC134050.1-201ENST00000495088 933 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC012339.2-201ENST00000523996 453 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 DEFB130C-202ENST00000530001 230 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC023813.2-201ENST00000564321 469 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC106785.1-201ENST00000565935 262 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC015688.2-201ENST00000584523 262 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC006116.5-201ENST00000591936 559 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 VN1R88P-201ENST00000596787 292 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC083899.3-201ENST00000603413 594 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC069304.3-201ENST00000603938 1084 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC099669.2-201ENST00000616549 437 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC009159.2-201ENST00000617603 606 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC243756.2-201ENST00000618406 463 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AK6-205ENST00000618980 483 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC006963.1-201ENST00000624003 1052 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC097520.1-201ENST00000624435 385 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AF001550.2-201ENST00000636643 217 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC006927.4-201ENST00000639187 543 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC000367.1-201ENST00000452711 1766 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 SALL4P2-201ENST00000423288 2910 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AC022031.1-201ENST00000585985 2593 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RNA5SP455-201ENST00000365190 119 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RNU6-761P-201ENST00000384148 107 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 MIR600-201ENST00000385007 98 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RNA5SP239-201ENST00000410218 129 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RN7SKP114-201ENST00000410327 279 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RNA5SP44-201ENST00000410446 133 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RNU6-272P-201ENST00000411028 104 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RNU6-575P-201ENST00000411326 105 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AC004022.2-201ENST00000413824 193 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 PRELID3BP11-201ENST00000414230 479 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AL009174.1-201ENST00000426577 416 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AP001324.1-201ENST00000428553 399 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 NANOGP2-201ENST00000435391 727 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AC105402.2-201ENST00000438503 358 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RPS26P2-201ENST00000440331 348 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 EEF1A1P39-201ENST00000440791 250 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 VN1R25P-201ENST00000443385 738 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 ELOCP13-201ENST00000443934 329 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AC015724.1-201ENST00000478577 156 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AK3P4-201ENST00000504283 583 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AC011352.3-201ENST00000505162 593 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 MTATP6P22-201ENST00000507369 598 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 RNU6-311P-201ENST00000516224 102 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AC008562.1-201ENST00000521763 330 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AC092747.2-201ENST00000545069 983 ntBASIC3.99□□□□□ -1.77
PDLIM3Q53GG5 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms