Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LTBQ06643 RBPJP2-201ENST00000618187 1444 ntBASIC4.38□□□□□ -1.71
LTBQ06643 CASC19-206ENST00000641028 1430 ntBASIC4.38□□□□□ -1.71
LTBQ06643 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.37□□□□□ -1.71
LTBQ06643 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
LTBQ06643 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.37□□□□□ -1.71
LTBQ06643 AC093775.1-201ENST00000624154 1868 ntBASIC4.37□□□□□ -1.71
LTBQ06643 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LTBQ06643 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 AL034370.1-201ENST00000397254 1590 ntBASIC4.37□□□□□ -1.71
LTBQ06643 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 AC073055.1-201ENST00000456901 1621 ntBASIC4.37□□□□□ -1.71
LTBQ06643 UGT2B26P-201ENST00000508672 1613 ntBASIC4.37□□□□□ -1.71
LTBQ06643 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.37□□□□□ -1.71
LTBQ06643 RNU6-543P-201ENST00000362576 108 ntBASIC4.37□□□□□ -1.71
LTBQ06643 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.37□□□□□ -1.71
LTBQ06643 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 AL590084.2-201ENST00000401481 382 ntBASIC4.37□□□□□ -1.71
LTBQ06643 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.37□□□□□ -1.71
LTBQ06643 E2F6P2-201ENST00000420708 748 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.37□□□□□ -1.71
LTBQ06643 PRELID3BP10-201ENST00000431957 584 ntBASIC4.37□□□□□ -1.71
LTBQ06643 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.37□□□□□ -1.71
LTBQ06643 BMS1P19-201ENST00000433925 393 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC093414.1-201ENST00000434712 514 ntBASIC4.37□□□□□ -1.71
LTBQ06643 YWHAZP7-201ENST00000436906 631 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.37□□□□□ -1.71
LTBQ06643 NPM1P33-201ENST00000438918 872 ntBASIC4.37□□□□□ -1.71
LTBQ06643 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.37□□□□□ -1.71
LTBQ06643 YWHAZP2-201ENST00000440317 728 ntBASIC4.37□□□□□ -1.71
LTBQ06643 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.37□□□□□ -1.71
LTBQ06643 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.37□□□□□ -1.71
LTBQ06643 HMGB1P48-201ENST00000446155 598 ntBASIC4.37□□□□□ -1.71
LTBQ06643 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.37□□□□□ -1.71
LTBQ06643 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 AC011979.1-201ENST00000472300 483 ntBASIC4.37□□□□□ -1.71
LTBQ06643 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.37□□□□□ -1.71
LTBQ06643 RN7SL41P-201ENST00000476144 297 ntBASIC4.37□□□□□ -1.71
LTBQ06643 RN7SL558P-201ENST00000497468 299 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 AC107401.1-201ENST00000503426 685 ntBASIC4.37□□□□□ -1.71
LTBQ06643 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.37□□□□□ -1.71
LTBQ06643 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 RN7SKP122-201ENST00000515923 296 ntBASIC4.37□□□□□ -1.71
LTBQ06643 Y_RNA.719-201ENST00000517156 106 ntBASIC4.37□□□□□ -1.71
LTBQ06643 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.37□□□□□ -1.71
LTBQ06643 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.37□□□□□ -1.71
LTBQ06643 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.37□□□□□ -1.71
LTBQ06643 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.37□□□□□ -1.71
LTBQ06643 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 BGLT3-201ENST00000564523 994 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC093249.4-201ENST00000564755 259 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC002400.1-201ENST00000569310 726 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 MTCO1P40-201ENST00000574371 625 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC091042.1-201ENST00000579213 173 ntBASIC4.37□□□□□ -1.71
LTBQ06643 SNORA74C-1-201ENST00000580726 201 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 AC097505.1-201ENST00000610199 565 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC007497.1-201ENST00000610421 561 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC104073.3-201ENST00000610942 955 ntBASIC4.37□□□□□ -1.71
LTBQ06643 AC007494.3-201ENST00000624660 743 ntBASIC4.37□□□□□ -1.71
LTBQ06643 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.37□□□□□ -1.71
LTBQ06643 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.37□□□□□ -1.71
LTBQ06643 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
LTBQ06643 AC092104.1-201ENST00000497346 1441 ntBASIC4.37□□□□□ -1.71
LTBQ06643 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LTBQ06643 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
LTBQ06643 AC099654.2-201ENST00000433031 1980 ntBASIC4.36□□□□□ -1.71
LTBQ06643 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.36□□□□□ -1.71
LTBQ06643 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LTBQ06643 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LTBQ06643 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LTBQ06643 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.36□□□□□ -1.71
LTBQ06643 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LTBQ06643 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.36□□□□□ -1.71
LTBQ06643 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.36□□□□□ -1.71
LTBQ06643 RNU6-757P-201ENST00000410334 100 ntBASIC4.36□□□□□ -1.71
LTBQ06643 LINC01881-201ENST00000416103 412 ntBASIC4.36□□□□□ -1.71
LTBQ06643 AC004690.1-201ENST00000418216 328 ntBASIC4.36□□□□□ -1.71
LTBQ06643 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.36□□□□□ -1.71
LTBQ06643 AC098592.1-201ENST00000419352 333 ntBASIC4.36□□□□□ -1.71
LTBQ06643 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.36□□□□□ -1.71
LTBQ06643 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.36□□□□□ -1.71
LTBQ06643 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LTBQ06643 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms