Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 HSPE1P12-201ENST00000412576 301 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP3S2P59780 NRBF2P2-201ENST00000413087 861 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 RPL23AP27-201ENST00000415161 451 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 AC007064.3-201ENST00000422608 359 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 AL355433.1-201ENST00000422804 300 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 RPL21P112-201ENST00000434403 463 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 HMGB1P12-201ENST00000438594 598 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 RPL6P9-201ENST00000466502 859 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 AC087312.1-201ENST00000471411 480 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 RN7SL604P-201ENST00000492589 296 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
AP3S2P59780 AC010265.1-201ENST00000513509 211 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.27□□□□□ -1.89
AP3S2P59780 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 HIGD1AP18-201ENST00000520730 278 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 CYCSP29-201ENST00000533731 318 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 AC025260.1-201ENST00000548858 430 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 SYF2P1-201ENST00000550658 413 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.27□□□□□ -1.89
AP3S2P59780 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 MIR3176-201ENST00000582210 90 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 FAM60CP-201ENST00000591086 664 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 SNORA51-201ENST00000606420 132 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 AC090948.1-201ENST00000607464 549 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 MIR6861-201ENST00000618657 64 ntBASIC3.27□□□□□ -1.89
AP3S2P59780 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S2P59780 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP3S2P59780 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP3S2P59780 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP3S2P59780 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP3S2P59780 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.27□□□□□ -1.89
AP3S2P59780 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S2P59780 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S2P59780 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
AP3S2P59780 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S2P59780 AC118273.1-201ENST00000525324 3006 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S2P59780 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S2P59780 RNA5SP399-201ENST00000364003 117 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 SNORA7.2-201ENST00000364446 145 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 MIR621-201ENST00000384919 96 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
AP3S2P59780 AL136116.1-201ENST00000403591 381 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 RPL23AP47-201ENST00000408017 460 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 MIR1282-201ENST00000408865 101 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 RNU6-55P-201ENST00000411092 107 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 RNU6-954P-201ENST00000411355 107 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 BTF3P9-201ENST00000418784 283 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 OSTCP5-201ENST00000425293 453 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AL158071.1-201ENST00000430315 461 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AC008072.1-201ENST00000434254 824 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 VN1R48P-201ENST00000448149 1036 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3S2P59780 AC099563.1-201ENST00000456086 418 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3S2P59780 RPS20P21-201ENST00000466859 343 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S2P59780 TRBV8-2-201ENST00000475637 270 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.26□□□□□ -1.89
AP3S2P59780 NCOR1P1-202ENST00000486162 291 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 RPS3AP50-201ENST00000487064 803 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S2P59780 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S2P59780 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.26□□□□□ -1.89
AP3S2P59780 RNA5SP34-201ENST00000516887 130 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S2P59780 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S2P59780 OR5AP1P-201ENST00000529730 940 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S2P59780 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S2P59780 RBM7-208ENST00000545678 867 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S2P59780 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S2P59780 MTND4LP24-201ENST00000572277 291 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AC027281.1-201ENST00000574178 758 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AC011445.2-201ENST00000599274 173 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AL161729.3-201ENST00000603533 673 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 MIR7151-201ENST00000617477 60 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S2P59780 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S2P59780 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
AP3S2P59780 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3S2P59780 AL139254.3-201ENST00000641097 674 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 AC006042.3-201ENST00000454684 1469 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
AP3S2P59780 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.26□□□□□ -1.89
AP3S2P59780 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
AP3S2P59780 CCT8P1-201ENST00000413611 1657 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3S2P59780 DHX40P1-201ENST00000588725 1412 ntBASIC3.26□□□□□ -1.89
AP3S2P59780 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms