Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC008745.1-201ENST00000604064 271 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 ARF4P1-201ENST00000605447 541 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AC015802.5-201ENST00000607478 399 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC020658.4-201ENST00000613987 684 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 MIR7151-201ENST00000617477 60 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AL713922.2-201ENST00000619384 716 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC006065.5-201ENST00000623427 349 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 OR5BE1P-202ENST00000641168 1176 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CX3CR1P49238 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CR1P49238 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CR1P49238 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 ZNF90P1-201ENST00000480493 1951 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 RAD1P1-201ENST00000231383 813 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CX3CR1P49238 OR11H4-201ENST00000315409 1082 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CR1P49238 SNORA70E-201ENST00000384492 135 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CX3CR1P49238 RNU11-4P-201ENST00000391149 133 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 TAF9BP2-201ENST00000400856 499 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 RNU2-17P-201ENST00000410290 190 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 HSPE1P12-201ENST00000412576 301 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 YY1P1-201ENST00000427625 668 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 MTND4LP14-201ENST00000429447 288 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AL365396.1-201ENST00000430854 671 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 RPL37P1-201ENST00000432310 284 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.52□□□□□ -1.85
CX3CR1P49238 AC096638.2-201ENST00000434965 711 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CR1P49238 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.52□□□□□ -1.85
CX3CR1P49238 CEACAMP9-201ENST00000442990 513 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CR1P49238 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 TRBV8-2-201ENST00000475637 270 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 AC105137.1-201ENST00000484355 562 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 AC091167.1-201ENST00000492017 396 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CR1P49238 CDH12P4-201ENST00000517835 295 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 CDH12P3-201ENST00000517935 295 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 CDH12P1-201ENST00000518435 295 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 HMGB1P23-201ENST00000518743 568 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CX3CR1P49238 OR5AK3P-201ENST00000527486 1297 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.52□□□□□ -1.85
CX3CR1P49238 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 CBX3P5-201ENST00000552017 521 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC022968.1-201ENST00000567372 442 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CR1P49238 AC007448.1-201ENST00000582714 234 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 MIR4443-201ENST00000585052 53 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CR1P49238 MRPS35P3-201ENST00000603189 709 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC104785.1-201ENST00000603220 588 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 KATNBL1P1-201ENST00000605192 748 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 MIR6820-201ENST00000611508 62 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AL645927.2-201ENST00000618350 349 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CX3CR1P49238 AL162233.1-201ENST00000620014 944 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 MIR8059-201ENST00000620427 81 ntBASIC3.52□□□□□ -1.85
CX3CR1P49238 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CR1P49238 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CR1P49238 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CX3CR1P49238 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
CX3CR1P49238 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CX3CR1P49238 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.52□□□□□ -1.85
CX3CR1P49238 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CR1P49238 NCAPGP1-201ENST00000505112 1814 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CX3CR1P49238 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CX3CR1P49238 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CR1P49238 SNORD51.1-201ENST00000365405 77 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 RNU2-21P-201ENST00000410368 188 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CR1P49238 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC108032.1-201ENST00000416706 207 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CR1P49238 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CR1P49238 AC092685.1-201ENST00000447960 1243 ntBASIC3.51□□□□□ -1.85
CX3CR1P49238 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CR1P49238 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms