Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD4P46934 AC112206.4-201ENST00000515142 405 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 RNU6-1102P-201ENST00000516149 96 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD4P46934 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.48□□□□□ -1.69
NEDD4P46934 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD4P46934 OSBPL9P3-201ENST00000534523 595 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD4P46934 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.48□□□□□ -1.69
NEDD4P46934 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD4P46934 AC093510.2-201ENST00000562820 896 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 AC006130.2-201ENST00000586202 326 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.48□□□□□ -1.69
NEDD4P46934 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.48□□□□□ -1.69
NEDD4P46934 AL020997.2-201ENST00000602607 184 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 AL137849.1-201ENST00000604767 169 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 SNORA62.6-201ENST00000606322 83 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.48□□□□□ -1.69
NEDD4P46934 AP003392.5-201ENST00000607857 415 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 AC005344.1-201ENST00000613391 459 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 AC097460.3-201ENST00000623099 442 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD4P46934 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.48□□□□□ -1.69
NEDD4P46934 LINC02471-203ENST00000641941 4752 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD4P46934 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.48□□□□□ -1.69
NEDD4P46934 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD4P46934 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
NEDD4P46934 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD4P46934 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
NEDD4P46934 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD4P46934 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEDD4P46934 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.48□□□□□ -1.69
NEDD4P46934 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
NEDD4P46934 RNU1-18P-201ENST00000363062 164 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 RNU1-64P-201ENST00000365443 163 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NEDD4P46934 TAF9BP2-201ENST00000400856 499 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NEDD4P46934 ARL2BPP3-201ENST00000421226 480 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AL158073.1-201ENST00000426848 1104 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AL591419.1-201ENST00000427423 339 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 UBE2V1P6-201ENST00000430840 422 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD4P46934 RRM2P4-201ENST00000441721 562 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AL359073.1-201ENST00000448036 403 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD4P46934 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD4P46934 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 RN7SKP141-201ENST00000516167 338 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 AP000859.1-201ENST00000525536 307 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NEDD4P46934 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.47□□□□□ -1.69
NEDD4P46934 AC004923.2-201ENST00000529649 369 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.47□□□□□ -1.69
NEDD4P46934 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 AC023158.1-201ENST00000561632 1025 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 AC244505.7-201ENST00000599675 272 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AL451086.1-201ENST00000605596 223 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.47□□□□□ -1.69
NEDD4P46934 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NEDD4P46934 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.47□□□□□ -1.69
NEDD4P46934 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NEDD4P46934 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.46□□□□□ -1.69
NEDD4P46934 RPL7P60-201ENST00000397636 735 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 ZNF602P-201ENST00000405929 924 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 SNORA3.3-201ENST00000408712 125 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 OR6K4P-201ENST00000423179 955 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 HMGB3P5-201ENST00000428894 612 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 NDUFA5P10-201ENST00000432147 357 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 PTP4A1P3-201ENST00000433661 420 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 SDR42E1P3-201ENST00000438345 502 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.46□□□□□ -1.69
NEDD4P46934 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.46□□□□□ -1.69
NEDD4P46934 AL500522.2-201ENST00000448562 343 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 TRBV12-2-201ENST00000489763 344 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 AC113430.1-201ENST00000506872 718 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 RNA5SP143-201ENST00000516936 115 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.46□□□□□ -1.69
NEDD4P46934 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.46□□□□□ -1.69
NEDD4P46934 AC025918.2-201ENST00000558683 763 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.46□□□□□ -1.69
NEDD4P46934 BNIP3P19-201ENST00000605397 577 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.46□□□□□ -1.69
NEDD4P46934 AL121772.2-201ENST00000614331 297 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 MAPK10-372ENST00000641954 3413 ntBASIC4.46□□□□□ -1.69
NEDD4P46934 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD4P46934 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD4P46934 AL359715.4-201ENST00000606629 1436 ntBASIC4.46□□□□□ -1.7
NEDD4P46934 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NEDD4P46934 AP004289.2-201ENST00000444413 1457 ntBASIC4.46□□□□□ -1.7
NEDD4P46934 AC024560.2-201ENST00000507981 1497 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms