Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-1P43699 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC018797.3-201ENST00000513388 1241 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 ATP5LP3-201ENST00000514223 304 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX2-1P43699 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX2-1P43699 MTND2P26-201ENST00000528255 1029 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX2-1P43699 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX2-1P43699 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 DYNLL1P4-201ENST00000549314 266 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-1P43699 DUXAP6-201ENST00000553858 601 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 MTND6P33-201ENST00000571794 183 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-1P43699 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC008751.2-201ENST00000597885 980 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-1P43699 MTND3P19-201ENST00000603825 345 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 DPRXP5-201ENST00000604662 539 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AC007390.2-201ENST00000606229 3803 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AL512329.2-201ENST00000607350 548 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 MIR6768-201ENST00000610734 72 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 SNX18P1Y-201ENST00000616231 511 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX2-1P43699 SNORA11.6-201ENST00000619030 128 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AL158163.2-201ENST00000619110 700 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AL022401.1-201ENST00000619498 108 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AC099494.2-201ENST00000623371 978 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NKX2-1P43699 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NKX2-1P43699 MTND4P10-201ENST00000446199 1363 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC025031.4-201ENST00000621248 3271 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-1P43699 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
NKX2-1P43699 TLK1P1-201ENST00000456760 2440 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-1P43699 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-1P43699 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-1P43699 RNU6-1214P-201ENST00000363650 109 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.84□□□□□ -1.79
NKX2-1P43699 RNU6-83P-201ENST00000384568 112 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AL161909.1-201ENST00000397390 712 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 BTBD10P2-201ENST00000404779 676 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AL590084.1-201ENST00000407885 387 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.84□□□□□ -1.79
NKX2-1P43699 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.84□□□□□ -1.79
NKX2-1P43699 RPL7P44-201ENST00000424827 742 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.84□□□□□ -1.79
NKX2-1P43699 SEPT7P5-201ENST00000434048 306 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 COX7BP2-201ENST00000437976 242 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.84□□□□□ -1.79
NKX2-1P43699 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-1P43699 MTCO2P25-201ENST00000447065 681 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 MYO5BP2-201ENST00000449815 1277 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.84□□□□□ -1.79
NKX2-1P43699 NDUFA5P7-201ENST00000452914 242 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 VN1R40P-201ENST00000455196 941 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC097484.1-201ENST00000471148 389 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 RN7SL222P-201ENST00000476452 299 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.84□□□□□ -1.79
NKX2-1P43699 AC024558.1-201ENST00000505008 528 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.84□□□□□ -1.79
NKX2-1P43699 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.84□□□□□ -1.79
NKX2-1P43699 PGAM1P13-201ENST00000507497 754 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.84□□□□□ -1.79
NKX2-1P43699 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.84□□□□□ -1.79
NKX2-1P43699 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.84□□□□□ -1.79
NKX2-1P43699 AC104057.1-201ENST00000515547 497 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 RNA5SP43-201ENST00000516559 110 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC087808.1-201ENST00000520501 361 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-1P43699 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.84□□□□□ -1.79
NKX2-1P43699 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.84□□□□□ -1.79
NKX2-1P43699 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NKX2-1P43699 AC004825.1-201ENST00000555068 586 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.84□□□□□ -1.79
NKX2-1P43699 AC093249.4-201ENST00000564755 259 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 OR1F2P-201ENST00000570470 933 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.84□□□□□ -1.79
NKX2-1P43699 BNIP3P24-201ENST00000593398 557 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 MRPS35P3-201ENST00000603189 709 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.84□□□□□ -1.79
NKX2-1P43699 AC097478.2-201ENST00000610572 514 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.84□□□□□ -1.79
NKX2-1P43699 MIR7154-201ENST00000620673 73 ntBASIC3.84□□□□□ -1.79
NKX2-1P43699 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NKX2-1P43699 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-1P43699 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX2-1P43699 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms