Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 MAPK10-279ENST00000641157 2449 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.69□□□□□ -1.02
HOXD11P31277 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.68□□□□□ -1.02
HOXD11P31277 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXD11P31277 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXD11P31277 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXD11P31277 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXD11P31277 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 SAGE2P-201ENST00000420011 2126 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
HOXD11P31277 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
HOXD11P31277 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXD11P31277 SNORA17.1-201ENST00000362945 126 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 RNU6-873P-201ENST00000363833 107 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 RNU6-136P-201ENST00000384663 107 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 RNA5SP297-201ENST00000391029 113 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 AC090114.1-201ENST00000393266 448 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 AC004986.1-201ENST00000414855 607 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXD11P31277 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC8.68□□□□□ -1.02
HOXD11P31277 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 AC064862.2-201ENST00000445460 196 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 SLAMF6P1-201ENST00000451067 602 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 AC127024.1-201ENST00000490847 418 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 UBE2CP3-201ENST00000502715 450 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 MRPL49P1-201ENST00000505951 535 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC8.68□□□□□ -1.02
HOXD11P31277 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC8.68□□□□□ -1.02
HOXD11P31277 SIGLEC31P-201ENST00000594237 551 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 AL590808.1-201ENST00000618696 141 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXD11P31277 AC111152.1-202ENST00000635848 339 ntBASIC8.68□□□□□ -1.02
HOXD11P31277 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 LRRC7-204ENST00000415775 3996 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXD11P31277 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.68□□□□□ -1.02
HOXD11P31277 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.68□□□□□ -1.02
HOXD11P31277 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXD11P31277 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXD11P31277 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
HOXD11P31277 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXD11P31277 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXD11P31277 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXD11P31277 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 MARCH10-203ENST00000544856 3338 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
HOXD11P31277 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC8.67□□□□□ -1.02
HOXD11P31277 AC007390.2-201ENST00000606229 3803 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 TMEM196-202ENST00000405844 4054 ntTSL 5 BASIC8.67□□□□□ -1.02
HOXD11P31277 UVSSA-201ENST00000324803 4441 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HOXD11P31277 ERG-204ENST00000398907 4809 ntTSL 5 BASIC8.67□□□□□ -1.02
HOXD11P31277 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HOXD11P31277 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 RNU6-78P-201ENST00000362897 107 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 RNA5SP125-201ENST00000364843 120 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 DLEU2L-201ENST00000371086 3555 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 RNA5SP35-201ENST00000391257 129 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.67□□□□□ -1.02
HOXD11P31277 RPL21P67-201ENST00000402896 478 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 U3.40-201ENST00000408706 208 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC8.67□□□□□ -1.02
HOXD11P31277 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC8.67□□□□□ -1.02
HOXD11P31277 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC8.67□□□□□ -1.02
HOXD11P31277 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC8.67□□□□□ -1.02
HOXD11P31277 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC8.67□□□□□ -1.02
HOXD11P31277 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.67□□□□□ -1.02
HOXD11P31277 TXNP3-201ENST00000454560 301 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 CUTA-213ENST00000494751 731 ntTSL 5 BASIC8.67□□□□□ -1.02
HOXD11P31277 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 Y_RNA.690-201ENST00000516603 95 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HOXD11P31277 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC8.67□□□□□ -1.02
HOXD11P31277 MIR378D2-201ENST00000580636 98 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 AC123788.2-201ENST00000612290 283 ntBASIC8.67□□□□□ -1.02
HOXD11P31277 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HOXD11P31277 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC8.67□□□□□ -1.02
HOXD11P31277 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC8.67□□□□□ -1.02
HOXD11P31277 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC8.67□□□□□ -1.02
HOXD11P31277 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HOXD11P31277 RGS6-219ENST00000622468 5453 ntTSL 5 BASIC8.67□□□□□ -1.02
HOXD11P31277 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC8.67□□□□□ -1.02
HOXD11P31277 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 271.1 ms