Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.52□□□□□ -1.85
CD40LGP29965 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD40LGP29965 RN7SKP209-201ENST00000516888 304 ntBASIC3.52□□□□□ -1.85
CD40LGP29965 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.52□□□□□ -1.85
CD40LGP29965 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.52□□□□□ -1.85
CD40LGP29965 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.52□□□□□ -1.85
CD40LGP29965 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.52□□□□□ -1.85
CD40LGP29965 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.52□□□□□ -1.85
CD40LGP29965 CENPUP2-201ENST00000555897 1186 ntBASIC3.52□□□□□ -1.85
CD40LGP29965 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.52□□□□□ -1.85
CD40LGP29965 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.52□□□□□ -1.85
CD40LGP29965 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.52□□□□□ -1.85
CD40LGP29965 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.52□□□□□ -1.85
CD40LGP29965 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.52□□□□□ -1.85
CD40LGP29965 HMGB1P51-201ENST00000605166 638 ntBASIC3.52□□□□□ -1.85
CD40LGP29965 AC090246.1-201ENST00000616499 426 ntBASIC3.52□□□□□ -1.85
CD40LGP29965 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.52□□□□□ -1.85
CD40LGP29965 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD40LGP29965 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD40LGP29965 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CD40LGP29965 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.52□□□□□ -1.85
CD40LGP29965 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD40LGP29965 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD40LGP29965 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CD40LGP29965 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CD40LGP29965 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD40LGP29965 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD40LGP29965 AC008033.1-201ENST00000216407 1162 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD40LGP29965 MIR585-201ENST00000384887 94 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 AL035696.2-201ENST00000407941 709 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 AC069218.2-201ENST00000411665 344 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.51□□□□□ -1.85
CD40LGP29965 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.51□□□□□ -1.85
CD40LGP29965 RPS15AP6-201ENST00000420703 385 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CD40LGP29965 AC068287.1-201ENST00000430283 295 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.51□□□□□ -1.85
CD40LGP29965 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.51□□□□□ -1.85
CD40LGP29965 AL512326.1-201ENST00000443050 721 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 AC023512.1-201ENST00000444513 499 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 NPM1P49-201ENST00000448027 714 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 TPT1P13-201ENST00000449760 499 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 SBDSP1-204ENST00000453858 737 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.51□□□□□ -1.85
CD40LGP29965 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.51□□□□□ -1.85
CD40LGP29965 RPL6P9-201ENST00000466502 859 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 CYCSP20-201ENST00000473154 315 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD40LGP29965 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.51□□□□□ -1.85
CD40LGP29965 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.51□□□□□ -1.85
CD40LGP29965 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.51□□□□□ -1.85
CD40LGP29965 AC093840.1-201ENST00000511599 336 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 HIGD1AP10-201ENST00000527837 282 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD40LGP29965 AC084783.1-201ENST00000565846 910 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 AP000919.1-202ENST00000581139 1264 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 PCNAP1-202ENST00000595299 752 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD40LGP29965 AP004372.1-201ENST00000604842 844 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 AL392112.1-201ENST00000605115 829 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 AL450489.1-201ENST00000612071 468 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 XIST_intron.1-201ENST00000619444 68 ntBASIC3.51□□□□□ -1.85
CD40LGP29965 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.51□□□□□ -1.85
CD40LGP29965 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.51□□□□□ -1.85
CD40LGP29965 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CD40LGP29965 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.5□□□□□ -1.85
CD40LGP29965 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CD40LGP29965 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.5□□□□□ -1.85
CD40LGP29965 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CD40LGP29965 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CD40LGP29965 RNU1-130P-201ENST00000363930 160 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.5□□□□□ -1.85
CD40LGP29965 RNU6-398P-201ENST00000384143 109 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CD40LGP29965 AC069213.2-201ENST00000420238 366 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 OR6C71P-201ENST00000432580 913 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 AC007563.3-201ENST00000433233 371 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 DHFRP3-201ENST00000455595 559 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 RPL7P32-201ENST00000457119 744 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 RPS20P21-201ENST00000466859 343 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 TRBV8-2-201ENST00000475637 270 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 AL049830.2-201ENST00000480072 201 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 RN7SL810P-201ENST00000493031 276 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.5□□□□□ -1.85
CD40LGP29965 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.5□□□□□ -1.85
CD40LGP29965 NDUFB9P3-201ENST00000521269 501 ntBASIC3.5□□□□□ -1.85
CD40LGP29965 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.5□□□□□ -1.85
CD40LGP29965 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.5□□□□□ -1.85
CD40LGP29965 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.5□□□□□ -1.85
CD40LGP29965 AP001160.4-201ENST00000596971 382 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms