Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MORF4L1P7-201ENST00000426038 703 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 MTATP6P11-201ENST00000428071 670 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 AC006011.1-201ENST00000442758 349 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 TPMTP4-201ENST00000450749 678 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 MTND2P30-201ENST00000456663 382 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.02□□□□□ -1.77
XRCC1P18887 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.02□□□□□ -1.77
XRCC1P18887 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.02□□□□□ -1.77
XRCC1P18887 AC093824.1-201ENST00000508796 343 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 SMARCE1P4-201ENST00000523647 241 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
XRCC1P18887 AP002812.4-201ENST00000532139 286 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.02□□□□□ -1.77
XRCC1P18887 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.02□□□□□ -1.77
XRCC1P18887 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.02□□□□□ -1.77
XRCC1P18887 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.02□□□□□ -1.77
XRCC1P18887 ZNF92P3-201ENST00000596594 954 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 AL671309.1-201ENST00000603750 544 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 AC123768.4-201ENST00000616244 701 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
XRCC1P18887 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
XRCC1P18887 RLIMP1-201ENST00000339626 1680 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
XRCC1P18887 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
XRCC1P18887 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
XRCC1P18887 MARK2P15-201ENST00000432204 2186 ntBASIC4.02□□□□□ -1.77
XRCC1P18887 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 METTL21EP-201ENST00000298105 713 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.01□□□□□ -1.77
XRCC1P18887 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 SNORA60-201ENST00000362396 134 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 RNA5SP283-201ENST00000365604 119 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 RNU6-628P-201ENST00000410675 107 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 TPT1P2-201ENST00000413105 503 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.01□□□□□ -1.77
XRCC1P18887 AC115285.1-201ENST00000424879 736 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 AL117339.2-201ENST00000430475 180 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.01□□□□□ -1.77
XRCC1P18887 AL353093.1-201ENST00000441292 436 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 RPL21P89-201ENST00000444021 467 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 YWHAQP9-201ENST00000445891 512 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.01□□□□□ -1.77
XRCC1P18887 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.01□□□□□ -1.77
XRCC1P18887 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.01□□□□□ -1.77
XRCC1P18887 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.01□□□□□ -1.77
XRCC1P18887 AC010285.3-201ENST00000511668 676 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 SNORA76.2-201ENST00000517095 137 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
XRCC1P18887 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.01□□□□□ -1.77
XRCC1P18887 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.01□□□□□ -1.77
XRCC1P18887 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.01□□□□□ -1.77
XRCC1P18887 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.01□□□□□ -1.77
XRCC1P18887 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.01□□□□□ -1.77
XRCC1P18887 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.01□□□□□ -1.77
XRCC1P18887 AL020997.2-201ENST00000602607 184 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 AC018618.2-201ENST00000604770 446 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.01□□□□□ -1.77
XRCC1P18887 AC128687.2-201ENST00000609657 566 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.01□□□□□ -1.77
XRCC1P18887 AL773545.4-201ENST00000637262 310 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
XRCC1P18887 AL513478.4-201ENST00000641636 310 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 CASC19-261ENST00000641853 1638 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.01□□□□□ -1.77
XRCC1P18887 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
XRCC1P18887 CYP1D1P-201ENST00000416662 1433 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 ERCC6-202ENST00000374127 1782 ntBASIC4.01□□□□□ -1.77
XRCC1P18887 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
XRCC1P18887 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
XRCC1P18887 MTND4P31-201ENST00000425607 1343 ntBASIC4□□□□□ -1.77
XRCC1P18887 AL627171.1-201ENST00000618845 1308 ntBASIC4□□□□□ -1.77
XRCC1P18887 BDP1P-201ENST00000582658 1990 ntBASIC4□□□□□ -1.77
XRCC1P18887 AC006042.3-201ENST00000454684 1469 ntBASIC4□□□□□ -1.77
XRCC1P18887 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
XRCC1P18887 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
XRCC1P18887 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
XRCC1P18887 MIR3074-201ENST00000384885 81 ntBASIC4□□□□□ -1.77
XRCC1P18887 TCEA1P4-201ENST00000415066 844 ntBASIC4□□□□□ -1.77
XRCC1P18887 MTND4P11-201ENST00000417020 1058 ntBASIC4□□□□□ -1.77
XRCC1P18887 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4□□□□□ -1.77
XRCC1P18887 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4□□□□□ -1.77
XRCC1P18887 MTCO3P4-201ENST00000419236 787 ntBASIC4□□□□□ -1.77
XRCC1P18887 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 AC073508.1-201ENST00000428866 656 ntBASIC4□□□□□ -1.77
XRCC1P18887 RPL7P4-203ENST00000430239 730 ntBASIC4□□□□□ -1.77
XRCC1P18887 PTP4A1P3-201ENST00000433661 420 ntBASIC4□□□□□ -1.77
XRCC1P18887 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 AC097499.1-201ENST00000444277 208 ntBASIC4□□□□□ -1.77
XRCC1P18887 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4□□□□□ -1.77
XRCC1P18887 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
XRCC1P18887 AL162151.2-201ENST00000448875 158 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms